RNA–Protein interactions for RNA: ENST00000428634.1

PEX11B-202, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2

Gene PEX11B, Length 667 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-202ENST00000428634 CES4AQ5XG92 561 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 LETMD1Q6P1Q0 360 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 MED27Q6P2C8 311 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 FAM92BQ6ZTR7 304 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 FAM47EQ6ZV65 393 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 PIP4P1Q86T03 277 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 SYVN1Q86TM6 617 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 TRIM73Q86UV7 250 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 KIAA2013Q8IYS2 634 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 OR4D9Q8NGE8 314 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 METTL6Q8TCB7 284 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 CHMP6Q96FZ7 201 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 CDK15Q96Q40 435 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 SORT1Q99523 831 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 MAP3K3Q99759 626 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 PLCD4Q9BRC7 762 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 SLC29A3Q9BZD2 475 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 NSRP1Q9H0G5 558 aaKnown RBP11.63□□□□□ -0.55
PEX11B-202ENST00000428634 PFDN4Q9NQP4 134 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 HAO1Q9UJM8 370 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 ADAM21Q9UKJ8 722 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 SNX6Q9UNH7 406 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 SH2B3Q9UQQ2 575 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 RNF11Q9Y3C5 154 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 TRAF6Q9Y4K3 522 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 PCDHGA11Q9Y5H2 935 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 KLK4Q9Y5K2 254 aa11.63□□□□□ -0.55
PEX11B-202ENST00000428634 COL5A1P20908 1838 aaPredicted RBP11.63□□□□□ -0.55
PEX11B-202ENST00000428634 A0A1W2PQM1 296 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 UBFD1O14562 309 aaKnown RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 EDF1O60869 148 aaKnown RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 ZBTB11O95625 1053 aaPredicted RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 CAPN1P07384 714 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 EZRP15311 586 aaKnown RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 MAGP20916 626 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 CSRP1P21291 193 aaKnown RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 MPSTP25325 297 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 VARSP26640 1264 aaKnown RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 ARRB2P32121 409 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 LSP1P33241 339 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 ARL4DP49703 201 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 PPP1CAP62136 330 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 RPS15AP62244 130 aaKnown RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 CSNK1G2P78368 415 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 REEP5Q00765 189 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 RELAQ04206 551 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 IFT88Q13099 833 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 RBBP5Q15291 538 aaKnown RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 TRIP6Q15654 476 aaKnown RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 CPSF6Q16630 551 aaKnown RBP eCLIP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 TMIGD1Q6UXZ0 262 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 PRSS42Q7Z5A4 293 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 GLRX5Q86SX6 157 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 FAM129CQ86XR2 697 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 KMT5CQ86Y97 462 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 WDR75Q8IWA0 830 aaKnown RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 FAM20CQ8IXL6 584 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 ZNF781Q8N8C0 355 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 CDYL2Q8N8U2 506 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 DCBLD1Q8N8Z6 715 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 C19orf47Q8N9M1 422 aaKnown RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 TTLQ8NG68 377 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 OR4K1Q8NGD4 311 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 PIWIL2Q8TC59 973 aaKnown RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 CCT6BQ92526 530 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 THAP11Q96EK4 314 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 TCTN2Q96GX1 697 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 TRAPPC9Q96Q05 1148 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 NUDT22Q9BRQ3 303 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 C20orf27Q9GZN8 174 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 ELOVL6Q9H5J4 265 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 NT5DC2Q9H857 520 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 ZNF395Q9H8N7 513 aaPredicted RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 SLC6A20Q9NP91 592 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 SLCO1B3Q9NPD5 702 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 GEMIN8Q9NWZ8 242 aaKnown RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 VTI1BQ9UEU0 232 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 KLHL3Q9UH77 587 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 ADGRE2Q9UHX3 823 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 ZDHHC2Q9UIJ5 367 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 ZNF225Q9UK10 706 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 ATXN7L1Q9ULK2 861 aaPredicted RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 FIS1Q9Y3D6 152 aa11.62□□□□□ -0.55
PEX11B-202ENST00000428634 ASCC3Q8N3C0 2202 aaKnown RBP11.62□□□□□ -0.55
PEX11B-202ENST00000428634 IGKV1-8A0A0C4DH67 115 aa11.61□□□□□ -0.55
PEX11B-202ENST00000428634 TRBC2A0A5B9 178 aa11.61□□□□□ -0.55
PEX11B-202ENST00000428634 OR2A25A4D2G3 310 aa11.61□□□□□ -0.55
PEX11B-202ENST00000428634 ANKDD1BA6NHY2 528 aa11.61□□□□□ -0.55
PEX11B-202ENST00000428634 SLC9B1P1A6NJY1 282 aa11.61□□□□□ -0.55
PEX11B-202ENST00000428634 H0YIV9 168 aa11.61□□□□□ -0.55
PEX11B-202ENST00000428634 NTN3O00634 580 aaPredicted RBP11.61□□□□□ -0.55
PEX11B-202ENST00000428634 PRAMEF4O60810 478 aa11.61□□□□□ -0.55
PEX11B-202ENST00000428634 ULK1O75385 1050 aa11.61□□□□□ -0.55
PEX11B-202ENST00000428634 TROVE2P10155 538 aaKnown RBP eCLIP11.61□□□□□ -0.55
PEX11B-202ENST00000428634 PCNAP12004 261 aa11.61□□□□□ -0.55
PEX11B-202ENST00000428634 PVRP15151 417 aa11.61□□□□□ -0.55
PEX11B-202ENST00000428634 GSTM2P28161 218 aa11.61□□□□□ -0.55
PEX11B-202ENST00000428634 SERPINB1P30740 379 aa11.61□□□□□ -0.55
PEX11B-202ENST00000428634 CSF2RBP32927 897 aa11.61□□□□□ -0.55
PEX11B-202ENST00000428634 MLLT3P42568 568 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms