RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 C14orf119Q9NWQ9 140 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 GDAP2Q9NXN4 497 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 KLF11O14901 512 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 PRAMEF12O95522 483 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 LDOC1O95751 146 aaPredicted RBP14.12□□□□□ -0.15
PTPRU-204ENST00000428026 TAF1AQ15573 450 aaPredicted RBP14.12□□□□□ -0.15
PTPRU-204ENST00000428026 SOWAHAQ2M3V2 549 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 SYPL2Q5VXT5 272 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 COQ8BQ96D53 544 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 LGR4Q9BXB1 951 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 ADAMTS6Q9UKP5 1117 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 PCDHGA11Q9Y5H2 935 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 CRYBG1Q9Y4K1 1723 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 LRRC72A6NJI9 287 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 SOCS7O14512 581 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 SYN3O14994 580 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 AHSGP02765 367 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 PRKCGP05129 697 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 ACVR2AP27037 513 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 TUBA1BP68363 451 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 FAM46CQ5VWP2 391 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 TMEM220Q6QAJ8 160 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 TUBA1AQ71U36 451 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 GPALPP1Q8IXQ4 340 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 IRGQQ8WZA9 623 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 MRTO4Q9UKD2 239 aaKnown RBP14.12□□□□□ -0.15
PTPRU-204ENST00000428026 INSL6Q9Y581 213 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 A0A1W2PRQ8 180 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 HLA-DQB2P05538 268 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 C8AP07357 584 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 CHRM1P11229 460 aaPredicted RBP14.12□□□□□ -0.15
PTPRU-204ENST00000428026 FSHRP23945 695 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 MAP2K4P45985 399 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 ADAM15Q13444 863 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 TMEM192Q8IY95 271 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 KREMEN2Q8NCW0 462 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 MUS81Q96NY9 551 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 FAM53CQ9NYF3 392 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 POFUT2Q9Y2G5 429 aa14.12□□□□□ -0.15
PTPRU-204ENST00000428026 GABRDO14764 452 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 DLDP09622 509 aaKnown RBP14.11□□□□□ -0.15
PTPRU-204ENST00000428026 DDX6P26196 483 aaKnown RBP eCLIP14.11□□□□□ -0.152e-7■■■■■ 40.2
PTPRU-204ENST00000428026 NDST2P52849 883 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 OCLNQ16625 522 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 UAP1L1Q3KQV9 507 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 SLC8B1Q6J4K2 584 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 MSANTD2Q6P1R3 559 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 TMEM53Q6P2H8 277 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 CNKSR3Q6P9H4 555 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 MND1Q9BWT6 205 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 ZNF350Q9GZX5 532 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 PCDH10Q9P2E7 1040 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 MKLN1Q9UL63 735 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 MAFFQ9ULX9 164 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 CMAHPQ9Y471 501 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 TEX264Q9Y6I9 313 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 METTL21EPA6NDL7 271 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 RPP14O95059 124 aaKnown RBP14.11□□□□□ -0.15
PTPRU-204ENST00000428026 ALPPP05187 535 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 SLC9A3P48764 834 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 FNTBP49356 437 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 OR12D2P58182 307 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 CREB5Q02930 508 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 PUM1Q14671 1186 aaKnown RBP eCLIP14.11□□□□□ -0.15
PTPRU-204ENST00000428026 ZCCHC12Q6PEW1 402 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 CCDC28AQ8IWP9 274 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 NIPA2Q8N8Q9 360 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 MSANTD3Q96H12 275 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 PRRG4Q9BZD6 226 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 RNF39Q9H2S5 420 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 FLRT1Q9NZU1 646 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 TMED5Q9Y3A6 229 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 FBP2O00757 339 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 NRP1O14786 923 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 SNAP29O95721 258 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 TGFB1P01137 390 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 GPD2P43304 727 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 IL10RBQ08334 325 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 AQP11Q8NBQ7 271 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 TRMT61BQ9BVS5 477 aaKnown RBP14.11□□□□□ -0.15
PTPRU-204ENST00000428026 MINDY3Q9H8M7 445 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 TRBC2A0A5B9 178 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 KHKP50053 298 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 ZNF81P51508 661 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 GBX2P52951 348 aaPredicted RBP14.11□□□□□ -0.15
PTPRU-204ENST00000428026 TMED4Q7Z7H5 227 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 IGDCC3Q8IVU1 814 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 OR5J2Q8NH18 312 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 TTYH2Q9BSA4 534 aa14.11□□□□□ -0.15
PTPRU-204ENST00000428026 THUMPD1Q9NXG2 353 aaKnown RBP14.11□□□□□ -0.15
PTPRU-204ENST00000428026 TLX2O43763 284 aaPredicted RBP14.1□□□□□ -0.15
PTPRU-204ENST00000428026 CD2P06729 351 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 C8GP07360 202 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 G6PDP11413 515 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 OR3A3P47888 321 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 OR3A2P47893 321 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 NCBP2P52298 156 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTPRU-204ENST00000428026 CRISP3P54108 245 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 MPP2Q14168 576 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 FBXO43Q4G163 708 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms