RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 FAM86C1Q9NVL1 165 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 C14orf119Q9NWQ9 140 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 IMPAD1Q9NX62 359 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ERVK13-1Q9NX77 482 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 CD274Q9NZQ7 290 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 NDUFAF4Q9P032 175 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 AKAP7Q9P0M2 348 aaPredicted RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 SAE1Q9UBE0 346 aaPredicted RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 AFF4Q9UHB7 1163 aaKnown RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 PSORS1C1Q9UIG5 152 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 NDRG4Q9ULP0 352 aaKnown RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 MGAT4BQ9UQ53 548 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 MAN2B2Q9Y2E5 1009 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 DTX4Q9Y2E6 619 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 PLEKHA6Q9Y2H5 1048 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 GSTK1Q9Y2Q3 226 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 PCDHB9Q9Y5E1 797 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 NUBP2Q9Y5Y2 271 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 IGLV3-22A0A075B6J6 115 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 LOC390937A0A1W2PQ73 354 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ELOVL7A1L3X0 281 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 DBX1A6NMT0 343 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM220BPB1ANY3 271 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 SPATA31C2B4DYI2 1134 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 TARM1B6A8C7 271 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 USP17L15C9J2P7 530 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 USP17L10C9JJH3 530 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 USP17L13C9JLJ4 530 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 USP17L11C9JVI0 530 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 USP17L18D6R9N7 530 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 USP17L22D6RA61 530 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 USP17L17D6RBQ6 530 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 USP17L19D6RCP7 530 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 USP17L20D6RJB6 530 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM86B1E9PN63 330 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 PSMD9O00233 223 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 UPK1AO00322 258 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 POLRMTO00411 1230 aaKnown RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 SOCS7O14512 581 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 FPGTO14772 594 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 PHYHO14832 338 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 DSCR3O14972 297 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 TO15178 435 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC16A4O15374 487 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 XPNPEP2O43895 674 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 MITFO75030 526 aaPredicted RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 AOC2O75106 756 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 RP2O75695 350 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 KRT33AO76009 404 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 PIGRP01833 764 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 C9P02748 559 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 LTFP02788 710 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 MT-ND1P03886 318 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 C4BPAP04003 597 aaKnown RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 CYBBP04839 570 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM86B2P0C5J1 330 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC35E2BP0CK96 405 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ERVK-10P10266 1014 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 SPI1P17947 270 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 PVALBP20472 110 aaPredicted RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 AGXTP21549 392 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 CBLP22681 906 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ACSL1P33121 698 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 CD68P34810 354 aaPredicted RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ADRA1BP35368 520 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 RPL35P42766 123 aaKnown RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 MAP2K4P45985 399 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 BAG6P46379 1132 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ASMTP46597 345 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 FNTBP49356 437 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 RARRES1P49788 294 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 CSRP3P50461 194 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 KCNQ1P51787 676 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 MAP2K6P52564 334 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 GMFBP60983 142 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 AP1S1P61966 158 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 EEF1A1P68104 462 aaKnown RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ABATP80404 500 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ALDH6A1Q02252 535 aaKnown RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 EEF1A2Q05639 463 aaKnown RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF33AQ06730 810 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 USP17L24Q0WX57 530 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 PWP1Q13610 501 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 RAPSNQ13702 412 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 CAPRIN1Q14444 709 aaKnown RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 FGFBP1Q14512 234 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 LARS2Q15031 903 aaKnown RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 DPYSL2Q16555 572 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 PPP1R3AQ16821 1122 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 FUT11Q495W5 492 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 VPS26BQ4G0F5 336 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 CYP27C1Q4G0S4 372 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 KLHL22Q53GT1 634 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 C2CD6Q53TS8 623 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 Q5BKY6 102 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM102BQ5T8I3 360 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM102AQ5T9C2 384 aaPredicted RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 EEF1A1P5Q5VTE0 462 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 RNLSQ5VYX0 342 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 SAXO2Q658L1 398 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms