RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 KIAA0040Q15053 153 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 IL23RQ5VWK5 629 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 FBXW10Q5XX13 1052 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 BLOC1S3Q6QNY0 202 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 TMPRSS11BQ86T26 416 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 SYT12Q8IV01 421 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 DSELQ8IZU8 1212 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 FAM174AQ8TBP5 190 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 SLC5A11Q8WWX8 675 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 HAUS8Q9BT25 410 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 THTPAQ9BU02 230 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 TMEM168Q9H0V1 697 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 PCED1AQ9H1Q7 454 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 TMEM74BQ9NUR3 256 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 IMP3Q9NV31 184 aaKnown RBP17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 SCHIP1Q9P0W5 487 aaPredicted RBP17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 TBC1D29Q9UFV1 150 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 PCDHGA11Q9Y5H2 935 aa17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.31■□□□□ 0.36
AC055811.2-201ENST00000427497 OR52A4PA6NMU1 304 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 A8MUI8 341 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 MTHFD1P11586 935 aaKnown RBP17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 NME5P56597 212 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 UFM1P61960 85 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 RPL38P63173 70 aaKnown RBP17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 RIPK1Q13546 671 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 TSTA3Q13630 321 aaPredicted RBP17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 CATSPEREQ5SY80 951 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 REP15Q6BDI9 236 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 CYP20A1Q6UW02 462 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 NXPE4Q6UWF7 544 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 C16orf89Q6UX73 402 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 RD3Q7Z3Z2 195 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 ULK2Q8IYT8 1036 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 DEFB107AQ8IZN7 70 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 PROKR1Q8TCW9 393 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 SMPDL3AQ92484 453 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 CMTM7Q96FZ5 175 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 TEX37Q96LM6 180 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 NPAS2Q99743 824 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 NRTNQ99748 197 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 EFCAB11Q9BUY7 163 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 MRPL1Q9BYD6 325 aaKnown RBP17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 ACTL8Q9H568 366 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 NDE1Q9NXR1 346 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 PILRBQ9UKJ0 227 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 POLR3HQ9Y535 204 aaPredicted RBP17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 HEBP2Q9Y5Z4 205 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 PCM1Q15154 2024 aa17.3■□□□□ 0.36
AC055811.2-201ENST00000427497 SPTY2D1-AS1A0A0U1RR47 76 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 A0A1W2PPV9 198 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 A6NCN8 305 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 C4orf47A7E2U8 309 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 BBIP1A8MTZ0 92 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 NRP2O60462 931 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 SEC22BO75396 215 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 SLC22A3O75751 556 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 G6PDP11413 515 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 HSD3B1P14060 373 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 CAPN3P20807 821 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 HSD3B2P26439 372 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 AK4P27144 223 aaPredicted RBP17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 DPP6P42658 865 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 RCAN2Q14206 197 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 TRIM61Q5EBN2 209 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 C10orf62Q5T681 223 aaPredicted RBP17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 PGM2L1Q6PCE3 622 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 SCUBE1Q8IWY4 988 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 PARP9Q8IXQ6 854 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 LAS2Q8IYD9 372 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 PGAM4Q8N0Y7 254 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 DEFB119Q8N690 84 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 LINC01555Q8NAE3 123 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 OR7G3Q8NG95 312 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 CCL4L1Q8NHW4 92 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 RAB11FIP5Q9BXF6 653 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 PCBD2Q9H0N5 130 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 BRF2Q9HAW0 419 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 EIF3LQ9Y262 564 aaKnown RBP17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 METTL12A8MUP2 240 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 NR5A2O00482 541 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 RASGRP1O95267 797 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 EML2O95834 649 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 PKLRP30613 574 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 HOXD12P35452 270 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 RAB28P51157 221 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 EIF2B5Q13144 721 aaKnown RBP17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 THEMIS2Q5TEJ8 643 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 PEAR1Q5VY43 1037 aaPredicted RBP17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 MED27Q6P2C8 311 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 HACD2Q6Y1H2 254 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 NRROSQ86YC3 692 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 HID1Q8IV36 788 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 RAB42Q8N4Z0 105 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 C2orf73Q8N5S3 287 aaPredicted RBP17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 CADM4Q8NFZ8 388 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 SLC45A3Q96JT2 553 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 CLPTM1LQ96KA5 538 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 FCRL1Q96LA6 429 aa17.29■□□□□ 0.36
AC055811.2-201ENST00000427497 KIR3DX1Q9H7L2 352 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms