RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 OTUD4Q01804 1114 aaKnown RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 EGR4Q05215 589 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 NCBP1Q09161 790 aaKnown RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 XRCC4Q13426 336 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 USF2Q15853 346 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 MAPK6Q16659 721 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 HNRNPA1L2Q32P51 320 aaKnown RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ANKRD55Q3KP44 614 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 CERKLQ49MI3 558 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 FBXO43Q4G163 708 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 CDONQ4KMG0 1287 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 Q5PR19 223 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 LRIF1Q5T3J3 769 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 PRAMEF7Q5VXH5 474 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 TMEM198Q66K66 360 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 SEL1L3Q68CR1 1132 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 GRHL2Q6ISB3 625 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 KIAA1161Q6NSJ0 714 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 FBXO42Q6P3S6 717 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 FOXR2Q6PJQ5 311 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF600Q6ZNG1 722 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 Q6ZNX1 250 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 VTCN1Q7Z7D3 282 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 TRIM74Q86UV6 250 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 TRIM73Q86UV7 250 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 CAMK1DQ8IU85 385 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 TMEM126BQ8IUX1 230 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 FOXRED2Q8IWF2 684 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 KATNAL2Q8IYT4 538 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 UBQLNLQ8IYU4 475 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 IZUMO1Q8IYV9 350 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF565Q8N9K5 539 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 SCAIQ8N9R8 606 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 BOLLQ8N9W6 283 aaKnown RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 CCDC63Q8NA47 563 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 GDPD5Q8WTR4 605 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 TMEM170AQ8WVE7 144 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 SLC25A28Q96A46 364 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 CIDECQ96AQ7 238 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 HAVCR1Q96D42 359 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ERLEC1Q96DZ1 483 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 OTUB1Q96FW1 271 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 BOD1Q96IK1 185 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 MAGED4Q96JG8 741 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF48Q96MX3 618 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF583Q96ND8 569 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 CITED1Q99966 193 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 KCNS3Q9BQ31 491 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 DUSP26Q9BV47 211 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 DPCDQ9BVM2 203 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 TDRD1Q9BXT4 1180 aaKnown RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 NUF2Q9BZD4 464 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 EGLN1Q9GZT9 426 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 SLC26A1Q9H2B4 701 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 BLZF1Q9H2G9 400 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 CATSPERBQ9H7T0 1116 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 SFXN1Q9H9B4 322 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 PCDH9Q9HC56 1237 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 CPNE5Q9HCH3 593 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 HHATLQ9HCP6 504 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 GALNT9Q9HCQ5 603 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 APMAPQ9HDC9 416 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 TMEM74BQ9NUR3 256 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 TAS2R14Q9NYV8 317 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 TFCP2L1Q9NZI6 479 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 PKD2L2Q9NZM6 624 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 MBD2Q9UBB5 411 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 CTNNAL1Q9UBT7 734 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 SERGEFQ9UGK8 458 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 PKP3Q9Y446 797 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 TMEM184BQ9Y519 407 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 SLCO1B1Q9Y6L6 691 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 KIF27Q86VH2 1401 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 PFASO15067 1338 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 SH3TC1Q8TE82 1336 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 BTBD17A6NE02 478 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 CBY3A6NI87 242 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 LRRIQ3A6PVS8 624 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 ANKRD30BLA7E2S9 258 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 IFNL4K9M1U5 179 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 AKR7A2O43488 359 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 LCMT2O60294 686 aaKnown RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 CBR3O75828 277 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 SUN1O94901 812 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 CBX6O95503 412 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 ECDO95905 644 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 TGM6O95932 706 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 CLPTM1O96005 669 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 C1RP00736 705 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 HLA-DQA2P01906 255 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 IGFBP1P08833 259 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 RRASP10301 218 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 APEHP13798 732 aaKnown RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 MYL6BP14649 208 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 CPA3P15088 417 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 ANPEPP15144 967 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 LBPP18428 481 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 TGM2P21980 687 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 PSMB4P28070 264 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms