RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 GOLGA6L4A6NEF3 574 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 F8VZ95 297 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 UBFD1O14562 309 aaKnown RBP5.92□□□□□ -1.46
SDCBP-203ENST00000424270 IL2RAP01589 272 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 SRD5A1P18405 259 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 PDHA2P29803 388 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 SOX18P35713 384 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 GCGRP47871 477 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 AVPR1BP47901 424 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 MAT1AQ00266 395 aaKnown RBP5.92□□□□□ -1.46
SDCBP-203ENST00000424270 SORDQ00796 357 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 FMO1Q01740 532 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 OGDHQ02218 1023 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 SYT16Q17RD7 645 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 CLEC16AQ2KHT3 1053 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 HYAL4Q2M3T9 481 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 BCL7AQ4VC05 210 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 UBAP2Q5T6F2 1119 aaKnown RBP5.92□□□□□ -1.46
SDCBP-203ENST00000424270 ALG1LQ6GMV1 187 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 RTL6Q6ICC9 239 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 FRMPD2BQ6IN97 320 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 H3F3CQ6NXT2 135 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 PAPD4Q6PIY7 484 aaKnown RBP5.92□□□□□ -1.46
SDCBP-203ENST00000424270 TMEM205Q6UW68 189 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 C20orf204Q6ZNR8 217 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 PLEKHM3Q6ZWE6 761 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 MAATS1Q7Z4T9 603 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 SLC22A16Q86VW1 577 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 PSTKQ8IV42 348 aaKnown RBP5.92□□□□□ -1.46
SDCBP-203ENST00000424270 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.92□□□□□ -1.46
SDCBP-203ENST00000424270 CYP4X1Q8N118 509 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 SLC25A41Q8N5S1 370 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 C3orf56Q8N813 242 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 ZNF830Q96NB3 372 aaPredicted RBP5.92□□□□□ -1.46
SDCBP-203ENST00000424270 DACH2Q96NX9 599 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 CYTH2Q99418 400 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 LPAR4Q99677 370 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 NPAS2Q99743 824 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 CNPPD1Q9BV87 410 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 CEP41Q9BYV8 373 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 ADAM19Q9H013 955 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 OR52A5Q9H2C5 316 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 GOLPH3LQ9H4A5 285 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 ASB8Q9H765 288 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 MMP25Q9NPA2 562 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 TIMMDC1Q9NPL8 285 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 CIDEBQ9UHD4 219 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 SLC39A10Q9ULF5 831 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 SPO11Q9Y5K1 396 aa5.92□□□□□ -1.46
SDCBP-203ENST00000424270 SEC16AO15027 2179 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 ANKRD12Q6UB98 2062 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 IGLV3-12A0A075B6K2 115 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 A0A0A6YYC8 382 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 ATP6AP2A0A1C7CYW4 349 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 A0A1W2PPR1 153 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 FITM1A5D6W6 292 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 SERINC4A6NH21 518 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 SOWAHDA6NJG2 315 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 I3L1I5 382 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 KCNK1O00180 336 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 BIN1O00499 593 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 GPR37O15354 613 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 STX7O15400 261 aaKnown RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 MFSD11O43934 449 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 VPS26AO75436 327 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 ATP6AP2O75787 350 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 MED26O95402 600 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 NDST3O95803 873 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 TUBB4AP04350 444 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 CCNCP24863 283 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 HMGCLP35914 325 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 AGTR2P50052 363 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 HLCSP50747 726 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 NR0B1P51843 470 aaKnown RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 AGFG1P52594 562 aaKnown RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 GSCP56915 257 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 PTP4A2Q12974 167 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 SIX1Q15475 284 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 SFT2D3Q587I9 215 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 KLHDC7AQ5VTJ3 777 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 POLNQ7Z5Q5 900 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 ANKRD37Q7Z713 158 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 CAND1Q86VP6 1230 aaKnown RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 PHF13Q86YI8 300 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 ZC3H7AQ8IWR0 971 aaKnown RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 TBC1D21Q8IYX1 336 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 SHISA5Q8N114 240 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 CSNK1A1LQ8N752 337 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 ZFP62Q8NB50 900 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 C16orf52Q8NHV5 167 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 FLVCR1-AS1Q8TAF5 88 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 MCOLN3Q8TDD5 553 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 MAML1Q92585 1016 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 ISL2Q96A47 359 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 RERGQ96A58 199 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 FAF2Q96CS3 445 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 LCORQ96JN0 433 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 LINC00615Q96LM1 132 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 COPS8Q99627 209 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 RBM24Q9BX46 236 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms