RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 TGFBIQ15582 683 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 OASLQ15646 514 aaKnown RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CCNG2Q16589 344 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 TRIM16LQ309B1 348 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 USP41Q3LFD5 358 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 MMEL1Q495T6 779 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 NADK2Q4G0N4 442 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CDONQ4KMG0 1287 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZC2HC1CQ53FD0 456 aaPredicted RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 ACSBG2Q5FVE4 666 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 TNFAIP8L3Q5GJ75 292 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 C6orf141Q5SZD1 244 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CCNJQ5T5M9 372 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM69BQ5VUD6 431 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLX4IPQ5VYV7 408 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM91A1Q658Y4 838 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 WBP2NLQ6ICG8 309 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CDC73Q6P1J9 531 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF449Q6P9G9 518 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 KCTD18Q6PI47 426 aaPredicted RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 RHBDF2Q6PJF5 856 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 WDR59Q6PJI9 974 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 C4orf22Q6V702 233 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CENPUQ71F23 418 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 FASTKD5Q7L8L6 764 aaKnown RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 HAUS6Q7Z4H7 955 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 DHDDSQ86SQ9 333 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 LRRC6Q86X45 466 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 TMEM126BQ8IUX1 230 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 KLHL7Q8IXQ5 586 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 SYCE1Q8N0S2 351 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CENPSQ8N2Z9 138 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 PGBD5Q8N414 524 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CARNMT1Q8N4J0 409 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZBTB2Q8N680 514 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 TRIML2Q8N7C3 387 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 LINC00469Q8N7U9 141 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 PCYOX1LQ8NBM8 494 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 ICA1LQ8NDH6 482 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 IL17REQ8NFR9 667 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 HUS1BQ8NHY5 278 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 GRPEL2Q8TAA5 225 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 SCFD2Q8WU76 684 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 SYN2Q92777 582 aaPredicted RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZUFSPQ96AP4 578 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM149B1Q96BN6 582 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CFAP36Q96G28 342 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CEP295NLQ96MC4 621 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 C7orf26Q96N11 449 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 ERGIC2Q96RQ1 377 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 DDX50Q9BQ39 737 aaKnown RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM110AQ9BQ89 295 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 EIF2AK1Q9BQI3 630 aaKnown RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 PSD2Q9BQI7 771 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 NEURL2Q9BR09 285 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CENPOQ9BU64 300 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLC26A6Q9BXS9 759 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 MRPL1Q9BYD6 325 aaKnown RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 EHD1Q9H4M9 534 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 PSTPIP2Q9H939 334 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 MARCH7Q9H992 704 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 GPR108Q9NPR9 543 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CCDC177Q9NQR7 707 aaPredicted RBP3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 ASAH2Q9NR71 780 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 STMN3Q9NZ72 180 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF224Q9NZL3 707 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLC9A2Q9UBY0 812 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 RAB26Q9ULW5 256 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 STON1Q9Y6Q2 735 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 NFAT5O94916 1531 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CPS1P31327 1500 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 CD163L1Q9NR16 1453 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 TET3O43151 1660 aa3.27□□□□□ -1.89
SDCBPP3-201ENST00000419629 ADAMTS12P58397 1594 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 ABCB11O95342 1321 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 AKAP12Q02952 1782 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 TULP4Q9NRJ4 1543 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 SAA2-SAA4A0A096LPE2 208 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 A0A1W2PQM1 296 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZSCAN5CA6NGD5 496 aaPredicted RBP3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 TXNDC9O14530 226 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 RNF113AO15541 343 aaKnown RBP3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 DENRO43583 198 aaKnown RBP3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 SULT1B1O43704 296 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 JRKO75564 520 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 RFPL2O75678 378 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 B3GALNT1O75752 331 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 PALMO75781 387 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 CCNDBP1O95273 360 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 SERPINB2P05120 415 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 S100A6P06703 90 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 ABCB1P08183 1280 aaPredicted RBP3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 SNRNP70P08621 437 aaKnown RBP3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 PCP11498 1178 aaKnown RBP3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 EEF2P13639 858 aaKnown RBP3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 KRT5P13647 590 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 FDPSP14324 419 aaKnown RBP3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 MYL6BP14649 208 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF23P17027 643 aa3.26□□□□□ -1.89
SDCBPP3-201ENST00000419629 CDH2P19022 906 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms