RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 KLK8O60259 260 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 SRPX2O60687 465 aaPredicted RBP17.85■□□□□ 0.45
PTCD3-204ENST00000418628 IPO13O94829 963 aaKnown RBP17.85■□□□□ 0.45
PTCD3-204ENST00000418628 NTRK1P04629 796 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 COL6A2P12110 1019 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 CSNK1G2P78368 415 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 ACAP2Q15057 778 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 FAM83EQ2M2I3 478 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 C18orf21Q32NC0 220 aaPredicted RBP17.85■□□□□ 0.45
PTCD3-204ENST00000418628 TCTE1Q5JU00 501 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 THEMIS2Q5TEJ8 643 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 SULT1C3Q6IMI6 304 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 RHBDD2Q6NTF9 364 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 ARHGEF39Q8N4T4 335 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 CHD6Q8TD26 2715 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 RNF31Q96EP0 1072 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 EGFL8Q99944 293 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 SELENOSQ9BQE4 189 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 ACTR5Q9H9F9 607 aaPredicted RBP17.85■□□□□ 0.45
PTCD3-204ENST00000418628 LHX9Q9NQ69 397 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 TLK1Q9UKI8 766 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 RNF112Q9ULX5 631 aa17.85■□□□□ 0.45
PTCD3-204ENST00000418628 DOCK10Q96BY6 2186 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 LOC105369274A0A096LPK9 316 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 LOC102723532A0A0G2JNH3 316 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 A0A0J9YVX5 310 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 LOC101059948A0A1B0GTJ6 334 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 H7BY64 318 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 CDH1P12830 882 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 WT1P19544 449 aaPredicted RBP17.84■□□□□ 0.45
PTCD3-204ENST00000418628 UCNP55089 124 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 PRTGQ2VWP7 1150 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 VASH2Q86V25 355 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 THOC6Q86W42 341 aaKnown RBP17.84■□□□□ 0.45
PTCD3-204ENST00000418628 GPR135Q8IZ08 494 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 OR4N4Q8N0Y3 316 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 NEIL2Q969S2 332 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 PRAP1Q96NZ9 151 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 GBP5Q96PP8 586 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 CCNL2Q96S94 520 aaPredicted RBP17.84■□□□□ 0.45
PTCD3-204ENST00000418628 AKIRIN1Q9H9L7 192 aaPredicted RBP17.84■□□□□ 0.45
PTCD3-204ENST00000418628 ZNF358Q9NW07 568 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 SRPK3Q9UPE1 567 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 SLC22A14Q9Y267 594 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 ASB1Q9Y576 335 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 PCSK5Q92824 1860 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 IGSF10Q6WRI0 2623 aa17.84■□□□□ 0.45
PTCD3-204ENST00000418628 KCNE1BA0A087WTH5 132 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 NCF1BA6NI72 391 aaPredicted RBP17.83■□□□□ 0.44
PTCD3-204ENST00000418628 NCF1CA8MVU1 366 aaPredicted RBP17.83■□□□□ 0.44
PTCD3-204ENST00000418628 H0YGG7 62 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 UBXN8O00124 270 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 CAPN1P07384 714 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 HBQ1P09105 142 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 NCF1P14598 390 aaPredicted RBP17.83■□□□□ 0.44
PTCD3-204ENST00000418628 LIFP15018 202 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 ITGAXP20702 1163 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 EMP3P54852 163 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 ARF3P61204 181 aaPredicted RBP17.83■□□□□ 0.44
PTCD3-204ENST00000418628 E2F2Q14209 437 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 NAA30Q147X3 362 aaPredicted RBP17.83■□□□□ 0.44
PTCD3-204ENST00000418628 TSNAXIP1Q2TAA8 658 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 LGSNQ5TDP6 509 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 YOD1Q5VVQ6 348 aaPredicted RBP17.83■□□□□ 0.44
PTCD3-204ENST00000418628 FAM198BQ6UWH4 519 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 SH2D5Q6ZV89 423 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 VN1R4Q7Z5H5 301 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 ZNF655Q8N720 491 aaPredicted RBP17.83■□□□□ 0.44
PTCD3-204ENST00000418628 PROKR1Q8TCW9 393 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 SLC5A11Q8WWX8 675 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 N4BP2L2Q92802 583 aaPredicted RBP17.83■□□□□ 0.44
PTCD3-204ENST00000418628 CABS1Q96KC9 395 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 VPS11Q9H270 941 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 PELI2Q9HAT8 420 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 ABCF3Q9NUQ8 709 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 PCDHGA6Q9Y5G7 932 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 PCDHGA4Q9Y5G9 962 aa17.83■□□□□ 0.44
PTCD3-204ENST00000418628 IQANK1A0A1B0GTG1 560 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 K7ENP7 123 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 MEN1O00255 615 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 MED26O95402 600 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 ONECUT2O95948 504 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 TUBBP07437 444 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 EPORP19235 508 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 F8A1P23610 371 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 GDF5P43026 501 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 GLRBP48167 497 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 TMPRSS3P57727 454 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 VSX2P58304 361 aaPredicted RBP17.82■□□□□ 0.44
PTCD3-204ENST00000418628 RPS15AP62244 130 aaKnown RBP17.82■□□□□ 0.44
PTCD3-204ENST00000418628 REEP5Q00765 189 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 MANEAQ5SRI9 462 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 LCN10Q6JVE6 187 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 INO80CQ6PI98 192 aaPredicted RBP17.82■□□□□ 0.44
PTCD3-204ENST00000418628 TMEM151AQ8N4L1 468 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 IL22RA1Q8N6P7 574 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 ACMSDQ8TDX5 336 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 EPS8L3Q8TE67 593 aaKnown RBP17.82■□□□□ 0.44
PTCD3-204ENST00000418628 THAP11Q96EK4 314 aa17.82■□□□□ 0.44
PTCD3-204ENST00000418628 CRELD1Q96HD1 420 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms