RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 ANXA6P08133 673 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 BCKDHAP12694 445 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 TCN1P20061 433 aaPredicted RBP8.11□□□□□ -1.11
USP54-203ENST00000418501 TIA1P31483 386 aaKnown RBP eCLIP8.11□□□□□ -1.11
USP54-203ENST00000418501 DPP6P42658 865 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 PFN3P60673 137 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 UFM1P61960 85 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 ZNF763Q0D2J5 394 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 CAPRIN1Q14444 709 aaKnown RBP8.11□□□□□ -1.11
USP54-203ENST00000418501 ELOCQ15369 112 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 SF1Q15637 639 aaKnown RBP8.11□□□□□ -1.11
USP54-203ENST00000418501 TMEM259Q4ZIN3 620 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 PIGGQ5H8A4 983 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 CCNYL2Q5T2Q4 361 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 KLK6Q92876 244 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 WDR34Q96EX3 536 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 PRR11Q96HE9 360 aaPredicted RBP8.11□□□□□ -1.11
USP54-203ENST00000418501 PANX1Q96RD7 426 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 C9orf16Q9BUW7 83 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 FBRSL1Q9HCM7 1045 aaKnown RBP8.11□□□□□ -1.11
USP54-203ENST00000418501 AURKCQ9UQB9 309 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 C5orf58C9J3I9 102 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 MTHFD1P11586 935 aaKnown RBP8.11□□□□□ -1.11
USP54-203ENST00000418501 CDH2P19022 906 aaPredicted RBP8.11□□□□□ -1.11
USP54-203ENST00000418501 HTR1EP28566 365 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 SLC7A1P30825 629 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 HMGCS1Q01581 520 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 LIPEQ05469 1076 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 EPS8Q12929 822 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 TP53BP2Q13625 1128 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 KIR2DS3Q14952 304 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 COL19A1Q14993 1142 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 SMAD2Q15796 467 aaKnown RBP8.11□□□□□ -1.11
USP54-203ENST00000418501 DUOXA1Q1HG43 343 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 FAM174BQ3ZCQ3 159 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 IFNEQ86WN2 208 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 EID3Q8N140 333 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 PQLC1Q8N2U9 271 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 OR2T12Q8NG77 320 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 RERGQ96A58 199 aaPredicted RBP8.11□□□□□ -1.11
USP54-203ENST00000418501 MRGPRX1Q96LB2 322 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 C3orf30Q96M34 536 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 KIR3DX1Q9H7L2 352 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 TMPRSS11EQ9UL52 423 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 LRCH1Q9Y2L9 728 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 DENND4CQ5VZ89 1909 aa8.11□□□□□ -1.11
USP54-203ENST00000418501 PEX1O43933 1283 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 KRT36O76013 467 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 DIO3P55073 304 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 MLLT1Q03111 559 aaPredicted RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 RFTN2Q52LD8 501 aaPredicted RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 TBCELQ5QJ74 424 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 TAF8Q7Z7C8 310 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 VRK3Q8IV63 474 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 DCBLD1Q8N8Z6 715 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 N4BP2L2Q92802 583 aaPredicted RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 TSSK3Q96PN8 268 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 DUSP26Q9BV47 211 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 ZDHHC5Q9C0B5 715 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 BHLHE41Q9C0J9 482 aaPredicted RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 TAC3Q9UHF0 121 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 OR1A2Q9Y585 309 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 AMD1P17707 334 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 CHI3L1P36222 383 aaPredicted RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 MAGEA8P43361 318 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 PTDSS1P48651 473 aaKnown RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 PRIM2P49643 509 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 TPMTP51580 245 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 TPD52P55327 224 aaPredicted RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 SRP54P61011 504 aaKnown RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 MED21Q13503 144 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 KHDC1Q4VXA5 237 aaKnown RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 PYCR3Q53H96 274 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 SLCO4C1Q6ZQN7 724 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 DNAJB14Q8TBM8 379 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 ZNF184Q99676 751 aaPredicted RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 LYARQ9NX58 379 aaKnown RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 TMEM181Q9P2C4 612 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 SCOCQ9UIL1 159 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 SAMD4AQ9UPU9 718 aaKnown RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 ENTPD4Q9Y227 616 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 KCNK6Q9Y257 313 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 PTPRSQ13332 1948 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 PRSS51A0A1B0GVH4 220 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 DHRS12A0PJE2 317 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 E7ENX8 843 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 SLC35G6P0C7Q6 338 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 PDHA2P29803 388 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 PRDX3P30048 256 aaKnown RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 HTR6P50406 440 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 SH3BGRP55822 239 aaPredicted RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 RPS15AP62244 130 aaKnown RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 TAP2Q03519 686 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 CYP4F3Q08477 520 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 ABHD18Q0P651 414 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 C18orf21Q32NC0 220 aaPredicted RBP8.1□□□□□ -1.11
USP54-203ENST00000418501 ANGPTL8Q6UXH0 198 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 Q6ZSR9 355 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 OR7G3Q8NG95 312 aa8.1□□□□□ -1.11
USP54-203ENST00000418501 MOCOSQ96EN8 888 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms