RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 TLE3Q04726 772 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 GPS2Q13227 327 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 MAP7Q14244 749 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 ACAP2Q15057 778 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 SULT1C3Q6IMI6 304 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 KLC3Q6P597 504 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 C6orf15Q6UXA7 325 aaPredicted RBP11.95□□□□□ -0.5
SKA1-203ENST00000417656 THOC6Q86W42 341 aaKnown RBP11.95□□□□□ -0.5
SKA1-203ENST00000417656 KLHDC8AQ8IYD2 350 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 OR4N4Q8N0Y3 316 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 TCAIMQ8N3R3 496 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 ESX1Q8N693 406 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 IL22RA1Q8N6P7 574 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 ZNF655Q8N720 491 aaPredicted RBP11.95□□□□□ -0.5
SKA1-203ENST00000417656 SLC38A9Q8NBW4 561 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 SLC5A11Q8WWX8 675 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 NEIL2Q969S2 332 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 ESAMQ96AP7 390 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 CLIP3Q96DZ5 547 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 DPH1Q9BZG8 443 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 ACTR5Q9H9F9 607 aaPredicted RBP11.95□□□□□ -0.5
SKA1-203ENST00000417656 STARD5Q9NSY2 213 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 XPR1Q9UBH6 696 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 SNX7Q9UNH6 387 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 SLC22A14Q9Y267 594 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 DYRK1BQ9Y463 629 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 ASB1Q9Y576 335 aa11.95□□□□□ -0.5
SKA1-203ENST00000417656 ANKRD11Q6UB99 2663 aaPredicted RBP11.95□□□□□ -0.5
SKA1-203ENST00000417656 MDC1Q14676 2089 aaKnown RBP11.95□□□□□ -0.5
SKA1-203ENST00000417656 CELSR3Q9NYQ7 3312 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 FOXO6A8MYZ6 492 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 GOLGA8RI6L899 631 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 TK2O00142 265 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 IPO13O94829 963 aaKnown RBP11.94□□□□□ -0.5
SKA1-203ENST00000417656 STATHP02808 62 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 NUDT17P0C025 328 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 MTHFD2P13995 350 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 STAT5AP42229 794 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 AGTR2P50052 363 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 MEF2AQ02078 507 aaPredicted RBP11.94□□□□□ -0.5
SKA1-203ENST00000417656 TSNAXIP1Q2TAA8 658 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 CDKL4Q5MAI5 379 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 MANEAQ5SRI9 462 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 CATSPEREQ5SY80 951 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 FBXO42Q6P3S6 717 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 TLDC1Q6P9B6 456 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 TIFABQ6ZNK6 161 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 TMPRSS11BQ86T26 416 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 TDRPQ86YL5 185 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 MREGQ8N565 214 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 RHEBL1Q8TAI7 183 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 UBTD2Q8WUN7 234 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 CRELD1Q96HD1 420 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 CABS1Q96KC9 395 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 SCYL1Q96KG9 808 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 ZNF285Q96NJ3 590 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 SLC7A5P2Q9GIP4 190 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 SPNS1Q9H2V7 528 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 PPCSQ9HAB8 311 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 TMEM184CQ9NVA4 438 aa11.94□□□□□ -0.5
SKA1-203ENST00000417656 CPSF2Q9P2I0 782 aaKnown RBP11.94□□□□□ -0.5
SKA1-203ENST00000417656 DHCR7Q9UBM7 475 aaKnown RBP11.94□□□□□ -0.5
SKA1-203ENST00000417656 PTBP2Q9UKA9 531 aaKnown RBP11.94□□□□□ -0.5
SKA1-203ENST00000417656 URB1O60287 2271 aaKnown RBP11.94□□□□□ -0.5
SKA1-203ENST00000417656 LOC101059948A0A1B0GTJ6 334 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 SYCE1LA8MT33 242 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 H0YGG7 62 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 P2RX6O15547 441 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 CCNT2O60583 730 aaKnown RBP11.93□□□□□ -0.5
SKA1-203ENST00000417656 MT-ND3P03897 115 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 EIF2S1P05198 315 aaKnown RBP11.93□□□□□ -0.5
SKA1-203ENST00000417656 COL6A2P12110 1019 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 GFAPP14136 432 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 LIFP15018 202 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 WT1P19544 449 aaPredicted RBP11.93□□□□□ -0.5
SKA1-203ENST00000417656 HRH2P25021 359 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 RORAP35398 523 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 GGT5P36269 586 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 BCL6P41182 706 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 GCGRP47871 477 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 CCR8P51685 355 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 ARF3P61204 181 aaPredicted RBP11.93□□□□□ -0.5
SKA1-203ENST00000417656 IFFO1Q0D2I5 559 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 ABHD18Q0P651 414 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 CDC16Q13042 620 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 GRM7Q14831 915 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 TCTE1Q5JU00 501 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 C1orf189Q5VU69 101 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 BROXQ5VW32 411 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 C19orf48Q6RUI8 117 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 LRRC70Q7Z2Q7 622 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 DSELQ8IZU8 1212 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 CYP4X1Q8N118 509 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 CSNK1A1LQ8N752 337 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 SNX31Q8N9S9 440 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 TTC29Q8NA56 475 aaPredicted RBP11.93□□□□□ -0.5
SKA1-203ENST00000417656 ABHD11Q8NFV4 315 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 CT55Q8WUE5 264 aa11.93□□□□□ -0.5
SKA1-203ENST00000417656 HNRNPLLQ8WVV9 542 aaKnown RBP11.93□□□□□ -0.5
SKA1-203ENST00000417656 MR1Q95460 341 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms