RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 ELF3P78545 371 aaPredicted RBP16.34■□□□□ 0.21
CALD1-204ENST00000417172 GPR18Q14330 331 aa16.34■□□□□ 0.21
CALD1-204ENST00000417172 PDCD4Q53EL6 469 aaKnown RBP16.34■□□□□ 0.21
CALD1-204ENST00000417172 ICE2Q659A1 982 aa16.34■□□□□ 0.21
CALD1-204ENST00000417172 SLC36A4Q6YBV0 504 aa16.34■□□□□ 0.21
CALD1-204ENST00000417172 VN1R5Q7Z5H4 357 aa16.34■□□□□ 0.21
CALD1-204ENST00000417172 ZNF761Q86XN6 746 aaPredicted RBP16.34■□□□□ 0.21
CALD1-204ENST00000417172 PLD3Q8IV08 490 aa16.34■□□□□ 0.21
CALD1-204ENST00000417172 DSELQ8IZU8 1212 aa16.34■□□□□ 0.21
CALD1-204ENST00000417172 FBXL6Q8N531 539 aa16.34■□□□□ 0.21
CALD1-204ENST00000417172 SLC37A2Q8TED4 501 aa16.34■□□□□ 0.21
CALD1-204ENST00000417172 MCUR1Q96AQ8 359 aa16.34■□□□□ 0.21
CALD1-204ENST00000417172 EHD1Q9H4M9 534 aa16.34■□□□□ 0.21
CALD1-204ENST00000417172 TNRC6BQ9UPQ9 1833 aaKnown RBP16.34■□□□□ 0.21
CALD1-204ENST00000417172 FRYLO94915 3013 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 ASPDHA6ND91 283 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 B4DGG1 531 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 SAP18O00422 153 aaKnown RBP16.33■□□□□ 0.21
CALD1-204ENST00000417172 PRICKLE3O43900 615 aaPredicted RBP16.33■□□□□ 0.21
CALD1-204ENST00000417172 SLC22A3O75751 556 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 BCKDHAP12694 445 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 HOXB3P14651 431 aaPredicted RBP16.33■□□□□ 0.21
CALD1-204ENST00000417172 DPP6P42658 865 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 CYP4F2P78329 520 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 CSTF3Q12996 717 aaKnown RBP16.33■□□□□ 0.21
CALD1-204ENST00000417172 FBXW10Q5XX13 1052 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 BLOC1S3Q6QNY0 202 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 AMIGO1Q86WK6 493 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 LAS2Q8IYD9 372 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 KRTCAP2Q8N6L1 136 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 FAM13CQ8NE31 585 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 GPR156Q8NFN8 814 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 SLC52A3Q9NQ40 469 aa16.33■□□□□ 0.21
CALD1-204ENST00000417172 SPEGQ15772 3267 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 BTN3A3O00478 584 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 SDC3O75056 442 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 TGFB1P01137 390 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 CSF2P04141 144 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 TDGF1P13385 188 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 AMD1P17707 334 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 PLCL1Q15111 1095 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 RBBP5Q15291 538 aaKnown RBP16.33■□□□□ 0.2
CALD1-204ENST00000417172 MMEL1Q495T6 779 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 PAGE2BQ5JRK9 111 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 TRIM48Q8IWZ4 208 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.33■□□□□ 0.2
CALD1-204ENST00000417172 MAML2Q8IZL2 1156 aaPredicted RBP16.33■□□□□ 0.2
CALD1-204ENST00000417172 ANKRD53Q8N9V6 530 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 KYQ8NBH2 561 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 FAM46DQ8NEK8 389 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 CMTM7Q96FZ5 175 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 RAB3IPQ96QF0 476 aaPredicted RBP16.33■□□□□ 0.2
CALD1-204ENST00000417172 SLC25A23Q9BV35 468 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 RAB11FIP5Q9BXF6 653 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 SLC6A20Q9NP91 592 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 DMRT3Q9NQL9 472 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 CPNE7Q9UBL6 633 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 VPS29Q9UBQ0 182 aa16.33■□□□□ 0.2
CALD1-204ENST00000417172 PI4KAP42356 2102 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 SERTM1A2A2V5 107 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 PDE5AO76074 875 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 CHRM5P08912 532 aaPredicted RBP16.32■□□□□ 0.2
CALD1-204ENST00000417172 NME1P15531 152 aaKnown RBP16.32■□□□□ 0.2
CALD1-204ENST00000417172 SDC1P18827 310 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 PRPH2P23942 346 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 MRPL19P49406 292 aaKnown RBP16.32■□□□□ 0.2
CALD1-204ENST00000417172 BLKP51451 505 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 PRDX1Q06830 199 aaKnown RBP16.32■□□□□ 0.2
CALD1-204ENST00000417172 RCAN2Q14206 197 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 MAPRE2Q15555 327 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 DNAL1Q4LDG9 190 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 TIGD2Q4W5G0 525 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 TMIGD1Q6UXZ0 262 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 ADCK2Q7Z695 626 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 ADGRF3Q8IZF5 1079 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 ABHD11Q8NFV4 315 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 DNASE2BQ8WZ79 361 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 EGLN2Q96KS0 407 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 TSSK3Q96PN8 268 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 SLC39A3Q9BRY0 314 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 IER2Q9BTL4 223 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 DUSP15Q9H1R2 295 aaPredicted RBP16.32■□□□□ 0.2
CALD1-204ENST00000417172 OR51B5Q9H339 312 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 IL1RL2Q9HB29 575 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 PRMT8Q9NR22 394 aaPredicted RBP16.32■□□□□ 0.2
CALD1-204ENST00000417172 MRGBPQ9NV56 204 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 EIF3LQ9Y262 564 aaKnown RBP16.32■□□□□ 0.2
CALD1-204ENST00000417172 PCDHB11Q9Y5F2 797 aa16.32■□□□□ 0.2
CALD1-204ENST00000417172 A0A088AWK7 358 aa16.31■□□□□ 0.2
CALD1-204ENST00000417172 ISM1B1AKI9 464 aa16.31■□□□□ 0.2
CALD1-204ENST00000417172 MRASO14807 208 aa16.31■□□□□ 0.2
CALD1-204ENST00000417172 CFLARO15519 480 aa16.31■□□□□ 0.2
CALD1-204ENST00000417172 STATHP02808 62 aa16.31■□□□□ 0.2
CALD1-204ENST00000417172 NDUFS1P28331 727 aa16.31■□□□□ 0.2
CALD1-204ENST00000417172 SHMT2P34897 504 aa16.31■□□□□ 0.2
CALD1-204ENST00000417172 CCR8P51685 355 aa16.31■□□□□ 0.2
CALD1-204ENST00000417172 POLR2JP52435 117 aaKnown RBP16.31■□□□□ 0.2
CALD1-204ENST00000417172 DGKQP52824 942 aa16.31■□□□□ 0.2
CALD1-204ENST00000417172 NXPH1P58417 271 aa16.31■□□□□ 0.2
CALD1-204ENST00000417172 UBE2IP63279 158 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms