RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 FLRT1Q9NZU1 646 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 ENTPD6O75354 484 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 PRAMEF12O95522 483 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 PTX3P26022 381 aaPredicted RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 GPD2P43304 727 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 IL10RBQ08334 325 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 ZDHHC20Q5W0Z9 365 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 GET4Q7L5D6 327 aaPredicted RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 METTL3Q86U44 580 aaKnown RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 SLC22A15Q8IZD6 547 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 PROKR2Q8NFJ6 384 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 OR14C36Q8NHC7 312 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 IRGQQ8WZA9 623 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 EFHD2Q96C19 240 aaPredicted RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 PHOX2BQ99453 314 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 UCK2Q9BZX2 261 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.74□□□□□ -0.53
UBR4-205ENST00000417040 PIGVQ9NUD9 493 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 NUDT15Q9NV35 164 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 GRIN3BO60391 1043 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 VNN2O95498 520 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 ESR1P03372 595 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 JUNP05412 331 aaKnown RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 ZNF823P16415 610 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 SLBPQ14493 270 aaKnown RBP eCLIP11.74□□□□□ -0.53
UBR4-205ENST00000417040 CERS6Q6ZMG9 384 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 OXR1Q8N573 874 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 ZNF676Q8N7Q3 588 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 YIPF7Q8N8F6 280 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 CD300LFQ8TDQ1 290 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 ZFAND2BQ8WV99 257 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 TIFAQ96CG3 184 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 NIFKQ9BYG3 293 aaKnown RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 MKLN1Q9UL63 735 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 PLEKHA6Q9Y2H5 1048 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 CLCA3PQ9Y6N3 262 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 MYOM1P52179 1685 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.73□□□□□ -0.53
UBR4-205ENST00000417040 UPK3BL1B0FP48 263 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 UPK3BL2E5RIL1 263 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 PPEF2O14830 753 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 RPL26P61254 145 aaKnown RBP11.73□□□□□ -0.53
UBR4-205ENST00000417040 PLCZ1Q86YW0 608 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 CCDC28AQ8IWP9 274 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 OR6C4Q8NGE1 309 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 DNAJA3Q96EY1 480 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 TEX46H3BTG2 121 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 LDB2O43679 373 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 PLATP00750 562 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 EPHX1P07099 455 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 ZNF3P17036 446 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 RGS19P49795 217 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 FAM217AQ8IXS0 508 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 SDR16C5Q8N3Y7 309 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 STOML3Q8TAV4 291 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 CLEC4DQ8WXI8 215 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 SMPDL3BQ92485 455 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 PEBP4Q96S96 227 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 TMEM168Q9H0V1 697 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 SMIM35A0A1B0GVV1 85 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 A8MUA0 341 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 GNAZP19086 355 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 IL12BP29460 328 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 HTR2BP41595 481 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 OR3A3P47888 321 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 OR3A2P47893 321 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 C1QTNF8P60827 252 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 SPANXN4Q5MJ08 99 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 GPC2Q8N158 579 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 DHRS1Q96LJ7 313 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 CCSER2Q9H7U1 834 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 RC3H2Q9HBD1 1191 aaKnown RBP11.73□□□□□ -0.53
UBR4-205ENST00000417040 ABCB8Q9NUT2 735 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 GSKIPQ9P0R6 139 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 NOP16Q9Y3C1 178 aaKnown RBP11.73□□□□□ -0.53
UBR4-205ENST00000417040 SPATA31D1Q6ZQQ2 1576 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 ARVCFO00192 962 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 HAS3O00219 553 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 OGNP20774 298 aaKnown RBP11.73□□□□□ -0.53
UBR4-205ENST00000417040 VAMP1P23763 118 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 GRK1Q15835 563 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 SPRED3Q2MJR0 410 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 EIF2S3LQ2VIR3 472 aaKnown RBP11.73□□□□□ -0.53
UBR4-205ENST00000417040 SLC35F1Q5T1Q4 408 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 FAM46CQ5VWP2 391 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 LIPKQ5VXJ0 399 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 UBE2Q1Q7Z7E8 422 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 ELMOD2Q8IZ81 293 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 OR8K3Q8NH51 312 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 AURKBQ96GD4 344 aaPredicted RBP11.73□□□□□ -0.53
UBR4-205ENST00000417040 ALPK1Q96QP1 1244 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 ZNF471Q9BX82 626 aaPredicted RBP11.73□□□□□ -0.53
UBR4-205ENST00000417040 VPS29Q9UBQ0 182 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 GPN3Q9UHW5 284 aaPredicted RBP11.73□□□□□ -0.53
UBR4-205ENST00000417040 PPM1AP35813 382 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 ACVRL1P37023 503 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 CRISP3P54108 245 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 HYAL2Q12891 473 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 GARNL3Q5VVW2 1013 aa11.73□□□□□ -0.53
UBR4-205ENST00000417040 KRTCAP2Q8N6L1 136 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms