RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 FOXS1O43638 330 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 TSPAN12O95859 305 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 SYF2O95926 243 aaKnown RBP14.38□□□□□ -0.11
UBXN4-203ENST00000416538 CD63P08962 238 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 ENO3P13929 434 aaPredicted RBP14.38□□□□□ -0.11
UBXN4-203ENST00000416538 EMP3P54852 163 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 TBPL1P62380 186 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 MRPL49Q13405 166 aaKnown RBP14.38□□□□□ -0.11
UBXN4-203ENST00000416538 PHKG1Q16816 387 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 VWA2Q5GFL6 755 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 HP1BP3Q5SSJ5 553 aaPredicted RBP14.38□□□□□ -0.11
UBXN4-203ENST00000416538 TRMT10BQ6PF06 316 aaKnown RBP14.38□□□□□ -0.11
UBXN4-203ENST00000416538 IGFL3Q6UXB1 125 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 VN1R4Q7Z5H5 301 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 LAPTM4BQ86VI4 370 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 CNTN4Q8IWV2 1026 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 LMNTD2Q8IXW0 634 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 FAM26EQ8N5C1 309 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 GALNT11Q8NCW6 608 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 CALML6Q8TD86 181 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 C8orf44Q96CB5 159 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 CAPZA3Q96KX2 299 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 EBNA1BP2Q99848 306 aaKnown RBP14.38□□□□□ -0.11
UBXN4-203ENST00000416538 CRB3Q9BUF7 120 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 CCDC68Q9H2F9 335 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 ZNF304Q9HCX3 659 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 C5AR2Q9P296 337 aa14.38□□□□□ -0.11
UBXN4-203ENST00000416538 NXT1Q9UKK6 140 aaKnown RBP14.38□□□□□ -0.11
UBXN4-203ENST00000416538 TCP11X1B4DZS4 312 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 ZSCAN12O43309 604 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 ZGLP1P0C6A0 271 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 FBLP22087 321 aaKnown RBP14.37□□□□□ -0.11
UBXN4-203ENST00000416538 ITGA3P26006 1051 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 RBBP7Q16576 425 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 HIF1AQ16665 826 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 SYT16Q17RD7 645 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 MUM1Q2TAK8 710 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 FAM214AQ32MH5 1076 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 BBS9Q3SYG4 887 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 CRB2Q5IJ48 1285 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 PRAMEF13Q5VWM6 474 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 PAQR3Q6TCH7 311 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 UBE2R2Q712K3 238 aaPredicted RBP14.37□□□□□ -0.11
UBXN4-203ENST00000416538 CUZD1Q86UP6 607 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 HPS6Q86YV9 775 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 CREG2Q8IUH2 290 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 EEF1AKMT1Q8WVE0 214 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 COL26A1Q96A83 441 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 SNRNP40Q96DI7 357 aaKnown RBP14.37□□□□□ -0.11
UBXN4-203ENST00000416538 CERS2Q96G23 380 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 CABS1Q96KC9 395 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 IKZF3Q9UKT9 509 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 PYCARDQ9ULZ3 195 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 G3BP2Q9UN86 482 aaKnown RBP14.37□□□□□ -0.11
UBXN4-203ENST00000416538 CHMP2BQ9UQN3 213 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 PDE10AQ9Y233 779 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 COMMD10Q9Y6G5 202 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 DOPEY1Q5JWR5 2465 aa14.37□□□□□ -0.11
UBXN4-203ENST00000416538 DIDO1Q9BTC0 2240 aaKnown RBP14.36□□□□□ -0.11
UBXN4-203ENST00000416538 BLACEA4D250 179 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 SEMA7AO75326 666 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 VPS26AO75436 327 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 AHSGP02765 367 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 PIM1P11309 404 aaPredicted RBP14.36□□□□□ -0.11
UBXN4-203ENST00000416538 EZRP15311 586 aaKnown RBP14.36□□□□□ -0.11
UBXN4-203ENST00000416538 TCP1P17987 556 aaKnown RBP14.36□□□□□ -0.11
UBXN4-203ENST00000416538 MAT1AQ00266 395 aaKnown RBP14.36□□□□□ -0.11
UBXN4-203ENST00000416538 AIMP2Q13155 320 aaKnown RBP14.36□□□□□ -0.11
UBXN4-203ENST00000416538 DSG2Q14126 1118 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 NAA25Q14CX7 972 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 TUBB8Q3ZCM7 444 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 SPANXN3Q5MJ09 141 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 PRMT9Q6P2P2 845 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 Q6ZS92 163 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 PRSS41Q7RTY9 318 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 ZC3H7AQ8IWR0 971 aaKnown RBP14.36□□□□□ -0.11
UBXN4-203ENST00000416538 PARP9Q8IXQ6 854 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 CFAP36Q96G28 342 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 PSMG3-AS1Q96PY0 264 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 OLFM1Q99784 485 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 MACROD1Q9BQ69 325 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 ATP13A2Q9NQ11 1180 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 SLAMF7Q9NQ25 335 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 SEMA3GQ9NS98 782 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 ASF1BQ9NVP2 202 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 ZNF282Q9UDV7 671 aaPredicted RBP14.36□□□□□ -0.11
UBXN4-203ENST00000416538 TRMT6Q9UJA5 497 aaKnown RBP14.36□□□□□ -0.11
UBXN4-203ENST00000416538 B3GNT3Q9Y2A9 372 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 PCDHGA10Q9Y5H3 936 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 CROCCQ5TZA2 2017 aa14.36□□□□□ -0.11
UBXN4-203ENST00000416538 A0A0A6YYC8 382 aaPredicted RBP14.35□□□□□ -0.11
UBXN4-203ENST00000416538 H7BY64 318 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 I3L1I5 382 aaPredicted RBP14.35□□□□□ -0.11
UBXN4-203ENST00000416538 EIF3FO00303 357 aaPredicted RBP14.35□□□□□ -0.11
UBXN4-203ENST00000416538 VPS4BO75351 444 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 CCNDBP1O95273 360 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 IGHEP01854 428 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 CELA2AP08217 269 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 COX6A1P12074 109 aa14.35□□□□□ -0.11
UBXN4-203ENST00000416538 HSD17B2P37059 387 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms