RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 ACTG1P63261 375 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 MVKQ03426 396 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 CHRNEQ04844 493 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 GRB10Q13322 594 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 MPPED2Q15777 294 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 TXNRD1Q16881 649 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 NADK2Q4G0N4 442 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 SLC39A12Q504Y0 691 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 SAMD4BQ5PRF9 694 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 BROXQ5VW32 411 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 CCNI2Q6ZMN8 369 aaPredicted RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 IZUMO1Q8IYV9 350 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 DAGLBQ8NCG7 672 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 DNAAF1Q8NEP3 725 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 OR13C9Q8NGT0 318 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 SLC35G2Q8TBE7 412 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 FAM3CQ92520 227 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 PSMG2Q969U7 264 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 MIB2Q96AX9 1013 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 TEFMQ96QE5 360 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 MMP19Q99542 508 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 KCTD14Q9BQ13 255 aaPredicted RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 DPH7Q9BTV6 452 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 MIR1-1HGQ9H1L0 117 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 SLC32A1Q9H598 525 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 TMBIM4Q9HC24 238 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 IGSF9Q9P2J2 1179 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 RCOR3Q9P2K3 495 aaPredicted RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 V9GYS6 101 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 UMODL1Q5DID0 1318 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 DAPK1P53355 1430 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 MTMR11A4FU01 709 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 E9PAM4 449 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 J3QRK9 145 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 BET1O15155 118 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 TLX3O43711 291 aaPredicted RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 RFPL2O75678 378 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 CSF2P04141 144 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 RPLP1P05386 114 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 IFNGR1P15260 489 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 ADSSP30520 456 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 GNRHRP30968 328 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 FMO3P31513 532 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 CHI3L1P36222 383 aaPredicted RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 ADARB1P78563 741 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 CHIT1Q13231 466 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 ANKRD39Q53RE8 183 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 TEX30Q5JUR7 227 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 HECTD2Q5U5R9 776 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 ZNF517Q6ZMY9 492 aaPredicted RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 USP53Q70EK8 1073 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 C8orf58Q8NAV2 365 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 ZNF439Q8NDP4 499 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 STXBP6Q8NFX7 210 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 PANK1Q8TE04 598 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 HMGB4Q8WW32 186 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 CELF1Q92879 486 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 RAB24Q969Q5 203 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 FBXL8Q96CD0 374 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 STACQ99469 402 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 NEUROG2Q9H2A3 272 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 NHEJ1Q9H9Q4 299 aaPredicted RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 IL21RQ9HBE5 538 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 SLC22A11Q9NSA0 550 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 VNN3Q9NY84 501 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 KCNK4Q9NYG8 393 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 PADI1Q9ULC6 663 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 SRPRBQ9Y5M8 271 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 WDR62O43379 1518 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 POLR1AO95602 1720 aaPredicted RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 PRAMEF22A3QJZ6 481 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 FAM205CA6NFA0 338 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 SLC28A1O00337 649 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 AQP7O14520 342 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 EIF1AYO14602 144 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 MAP2K7O14733 419 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 PRMT5O14744 637 aaPredicted RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 CLDN3O15551 220 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 SCGNO76038 276 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 NCK1P16333 377 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 HNRNPH3P31942 346 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 TAGLN2P37802 199 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 CASRP41180 1078 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 MTHFSP49914 203 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 TCL1AP56279 114 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 ABCE1P61221 599 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 DCAF7P61962 342 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 ACTA2P62736 377 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 ACTG2P63267 376 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 ACTC1P68032 377 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 ACTA1P68133 377 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 NRF1Q16656 503 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 PFKFB4Q16877 469 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 TMEM41BQ5BJD5 291 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 C16orf46Q6P387 395 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 C17orf107Q6ZR85 190 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 USP43Q70EL4 1123 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 KLBQ86Z14 1044 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 SLC9A9Q8IVB4 645 aa5.11□□□□□ -1.59
R3HDM1-204ENST00000410054 PDZD9Q8IXQ8 264 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms