RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 TIFABQ6ZNK6 161 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 THOC6Q86W42 341 aaKnown RBP19■□□□□ 0.63
PDLIM2-207ENST00000409417 OR4N4Q8N0Y3 316 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 RHEBL1Q8TAI7 183 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 AENQ8WTP8 325 aaKnown RBP19■□□□□ 0.63
PDLIM2-207ENST00000409417 GPR78Q96P69 363 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 OR2A5Q96R48 311 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 NDC1Q9BTX1 674 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 SLC7A5P2Q9GIP4 190 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 CNOT10Q9H9A5 744 aaKnown RBP19■□□□□ 0.63
PDLIM2-207ENST00000409417 GPN2Q9H9Y4 310 aaPredicted RBP19■□□□□ 0.63
PDLIM2-207ENST00000409417 CD274Q9NZQ7 290 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 PSMC3IPQ9P2W1 217 aaPredicted RBP19■□□□□ 0.63
PDLIM2-207ENST00000409417 FITM1A5D6W6 292 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 HAT1O14929 419 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 CDH1P12830 882 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 LIFP15018 202 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 GGT5P36269 586 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 GCGRP47871 477 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 SLC6A12P48065 614 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 CSNK1G2P78368 415 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 GRM7Q14831 915 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 YOD1Q5VVQ6 348 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 KLHDC8AQ8IYD2 350 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 DSELQ8IZU8 1212 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 PDPRQ8NCN5 879 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 ATOH8Q96SQ7 321 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 DPH2Q9BQC3 489 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 EFHD1Q9BUP0 239 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 PARD6BQ9BYG5 372 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 AKIRIN1Q9H9L7 192 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 PPCSQ9HAB8 311 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 PCMTD2Q9NV79 361 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 SLC22A14Q9Y267 594 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 KCNE2Q9Y6J6 123 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 MGAQ8IWI9 3026 aa18.99■□□□□ 0.63
PDLIM2-207ENST00000409417 KCNE1BA0A087WTH5 132 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 IQANK1A0A1B0GTG1 560 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 SYCE1LA8MT33 242 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 H0YGG7 62 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 TERTO14746 1132 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 IPO13O94829 963 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 S100BP04271 92 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 SHBGP04278 402 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 COL6A2P12110 1019 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 HSD17B3P37058 310 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 CCR8P51685 355 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 ARSFP54793 590 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 ARF3P61204 181 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 VAC14Q08AM6 782 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 COL28A1Q2UY09 1125 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 C18orf21Q32NC0 220 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 SNRNP27Q8WVK2 155 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 SLC5A11Q8WWX8 675 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 MR1Q95460 341 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 CPNE5Q9HCH3 593 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 WWOXQ9NZC7 414 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 NUDT4Q9NZJ9 180 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 PTBP2Q9UKA9 531 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 CROTQ9UKG9 612 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 ZFYVE26Q68DK2 2539 aa18.98■□□□□ 0.63
PDLIM2-207ENST00000409417 C21orf140B9A014 251 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 K7ENP7 123 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 TAPBPO15533 448 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 RFPL1O75677 317 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 EIF2S1P05198 315 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 DLSTP36957 453 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 GDF5P43026 501 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 GLRBP48167 497 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 RPS15AP62244 130 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 INO80CQ6PI98 192 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 OR4K1Q8NGD4 311 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 PROKR1Q8TCW9 393 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 EXT2Q93063 718 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 NEIL2Q969S2 332 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 RERGQ96A58 199 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 SLC45A3Q96JT2 553 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 CABS1Q96KC9 395 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 FAM117AQ9C073 453 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 SYNPO2LQ9H987 977 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 STARD5Q9NSY2 213 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 DYRK1BQ9Y463 629 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 SUPT3HB4E1H0 165 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 SUPT3HO75486 399 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 STK16O75716 305 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 WDR47O94967 919 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 TUBBP07437 444 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 MTHFD2P13995 350 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 WT1P19544 449 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 TCN2P20062 427 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 GRK3P35626 688 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 CXADRP78310 365 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 TSNAXIP1Q2TAA8 658 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 PRTGQ2VWP7 1150 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 FAM214AQ32MH5 1076 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 ZNF385CQ66K41 422 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 FAM199XQ6PEV8 388 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 PLD3Q8IV08 490 aa18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 PLD6Q8N2A8 252 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-207ENST00000409417 CSNK1A1LQ8N752 337 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms