RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TRBV2A0A0J9YWF9 115 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 A0A1W2PRB8 838 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 IL15P40933 162 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 NKX2-1P43699 371 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 VAMP7P51809 220 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 TUBA1BP68363 451 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 RPL24P83731 157 aaKnown RBP4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 HTD2P86397 168 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 AKAP17AQ02040 695 aaKnown RBP4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 CACNG1Q06432 222 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 PDE7AQ13946 482 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 STXBP2Q15833 593 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 IFI44LQ53G44 452 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 PHLDA2Q53GA4 152 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 FAM46CQ5VWP2 391 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 LYSMD4Q5XG99 296 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 NEK5Q6P3R8 708 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 FAM171BQ6P995 826 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 CREB3L2Q70SY1 520 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 LONP2Q86WA8 852 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 TMEM139Q8IV31 216 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 ARL6IP6Q8N6S5 226 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 OR11H4Q8NGC9 324 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 OR52E1Q8NGJ3 308 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 OLIG1Q8TAK6 271 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 TMEM186Q96B77 213 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 PYCR2Q96C36 320 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 PHPT1Q9NRX4 125 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 GPR173Q9NS66 373 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 INTS10Q9NVR2 710 aaKnown RBP4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 OCIAD1Q9NX40 245 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 TAS2R3Q9NYW6 316 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 ACTR3BQ9P1U1 418 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 NOCTQ9UK39 431 aaKnown RBP4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 ITM2BQ9Y287 266 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 KIAA1217Q5T5P2 1943 aa4.54□□□□□ -1.68
HMGB1P13-201ENST00000406019 A0A0G2JPF8 293 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 HNRNPCL3B7ZW38 293 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 TMEM150CB9EJG8 249 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 ARPC2O15144 300 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 CXCL14O95715 111 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 SERPING1P05155 500 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 SBK2P0C263 348 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 HNRNPCL4P0DMR1 293 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 GLIPR1P48060 266 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 PDX1P52945 283 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 B3GALT5-AS1P59052 145 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 RPS18P62269 152 aaKnown RBP4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 GFPT1Q06210 699 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 KLC1Q07866 573 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 GAMTQ14353 236 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 HLFQ16534 295 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 ITPRIPL2Q3MIP1 535 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 ASPGQ86U10 573 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 NLRP14Q86W24 1093 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 LMNTD2Q8IXW0 634 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 KIAA0895Q8NCT3 520 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 NEK11Q8NG66 645 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 OR10Q1Q8NGQ4 319 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 LNX1Q8TBB1 728 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 SLC26A7Q8TE54 656 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 GRHL3Q8TE85 626 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 SAP25Q8TEE9 199 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 MRPL38Q96DV4 380 aaKnown RBP4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 LINGO1Q96FE5 620 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 PGM2Q96G03 612 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 C17orf77Q96MU5 243 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 SPATA13Q96N96 652 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 FAM111AQ96PZ2 611 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 PKP2Q99959 881 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 C17orf62Q9BQA9 187 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 KRT23Q9C075 422 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 UBQLN3Q9H347 655 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 TLE6Q9H808 572 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 SYTL2Q9HCH5 934 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 OLFML3Q9NRN5 406 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 PKD2L2Q9NZM6 624 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 BLOC1S6Q9UL45 172 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 TMCC3Q9ULS5 477 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 KCNK6Q9Y257 313 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 FOXA2Q9Y261 457 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 VDAC3Q9Y277 283 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 PCDHGB1Q9Y5G3 927 aa4.53□□□□□ -1.68
HMGB1P13-201ENST00000406019 PFASO15067 1338 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 A0A087X0K7 114 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 C2orf92A0A1B0GVN3 265 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 IFITM10A6NMD0 228 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 BAG4O95429 457 aaKnown RBP4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 STAG3L1P0CL83 205 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 DLATP10515 647 aaKnown RBP4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 ELAVL4P26378 380 aaKnown RBP4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 GAS1P54826 345 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 IL10RBQ08334 325 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 NONOQ15233 471 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 RBBP7Q16576 425 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 ODF4Q2M2E3 257 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 CCNYL2Q5T2Q4 361 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 AGAP6Q5VW22 663 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 KLHL10Q6JEL2 608 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms