RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 HMGCLP35914 325 aa22.82■■□□□ 1.24
TRIOBP-203ENST00000403663 ELAVL3Q14576 367 aaKnown RBP22.82■■□□□ 1.24
TRIOBP-203ENST00000403663 LRRC66Q68CR7 880 aa22.82■■□□□ 1.24
TRIOBP-203ENST00000403663 Q8N9G6 341 aaPredicted RBP22.82■■□□□ 1.24
TRIOBP-203ENST00000403663 MFSD1Q9H3U5 465 aa22.82■■□□□ 1.24
TRIOBP-203ENST00000403663 USE1Q9NZ43 259 aa22.82■■□□□ 1.24
TRIOBP-203ENST00000403663 ZNF106Q9H2Y7 1883 aaKnown RBP22.82■■□□□ 1.24
TRIOBP-203ENST00000403663 LRRK1Q38SD2 2015 aa22.82■■□□□ 1.24
TRIOBP-203ENST00000403663 STX7O15400 261 aaKnown RBP22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 TNFRSF4P43489 277 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 SLC13A2Q13183 592 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 ENPP2Q13822 863 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 SELPLGQ14242 412 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 TMEM196Q5HYL7 178 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 MMAAQ8IVH4 418 aaKnown RBP22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 FAM86B1Q8N7N1 296 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 OR8D1Q8WZ84 308 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 ARRDC3Q96B67 414 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 YIPF6Q96EC8 236 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 NDEL1Q9GZM8 345 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 ITM2BQ9Y287 266 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 LOC100130705A0A1B0GUX0 176 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 NPPAP01160 153 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 PPP5CP53041 499 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 LCP2Q13094 533 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 ACOX1Q15067 660 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 BRAT1Q6PJG6 821 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 LACC1Q8IV20 430 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 RHOXF1Q8NHV9 184 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 DNASE1L2Q92874 299 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 PEX13Q92968 403 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 ZNF300Q96RE9 604 aaPredicted RBP22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 LYSMD1Q96S90 227 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 EXD2Q9NVH0 621 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 RIMKLBQ9ULI2 386 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 CRYL1Q9Y2S2 319 aa22.81■■□□□ 1.24
TRIOBP-203ENST00000403663 TSPAN11A1L157 253 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 CCDC159P0C7I6 412 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 PSMA3P25788 255 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 CA5AP35218 305 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 NKX2-5P52952 324 aaPredicted RBP22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 PTSQ03393 145 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 CARTPTQ16568 116 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 ZNF691Q5VV52 312 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 KIAA1211LQ6NV74 962 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 TPRG1Q6ZUI0 275 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 USP45Q70EL2 814 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 RORBQ92753 470 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 DNAJB9Q9UBS3 223 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 XPNPEP2O43895 674 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 GGT1P19440 569 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 GRK3P35626 688 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 MTPNP58546 118 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 DLEU7Q6UYE1 221 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 NUDT18Q6ZVK8 323 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 P2RY8Q86VZ1 359 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 OR4L1Q8NH43 312 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 PSMA8Q8TAA3 256 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 CAPSLQ8WWF8 208 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 HTRA1Q92743 480 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 LRIG1Q96JA1 1093 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 ATOH8Q96SQ7 321 aa22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 RBM4BQ9BQ04 359 aaKnown RBP22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 RBM4Q9BWF3 364 aaKnown RBP22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 SLIRPQ9GZT3 109 aaKnown RBP22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 SEMA4BQ9NPR2 832 aaPredicted RBP22.8■■□□□ 1.24
TRIOBP-203ENST00000403663 UPK3BL1B0FP48 263 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 LOC730098B7Z3J9 87 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 UPK3BL2E5RIL1 263 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 GAPDHSO14556 408 aaPredicted RBP22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 SPINT1O43278 529 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 NDUFB5O43674 189 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 FDXRP22570 491 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 TIAL1Q01085 375 aaKnown RBP eCLIP22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 TDGQ13569 410 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 NKG7Q16617 165 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 PIANPQ8IYJ0 282 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 IL17RCQ8NAC3 791 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 PPM1MQ96MI6 270 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 DSN1Q9H410 356 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 FAM234BA2RU67 622 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 CD3EAPO15446 510 aaKnown RBP22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 CRCPO75575 148 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 CST1P01037 141 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 PRNPP04156 253 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 CD6P30203 668 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 MC4RP32245 332 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 NR4A2P43354 598 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 NCS1P62166 190 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 LAPTM5Q13571 262 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 XKR7Q5GH72 579 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 PSAPL1Q6NUJ1 521 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 DPP10Q8N608 796 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 PROKR1Q8TCW9 393 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 ZNF566Q969W8 418 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 ZNF486Q96H40 463 aaPredicted RBP22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 C8orf33Q9H7E9 229 aaPredicted RBP22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 MOV10Q9HCE1 1003 aaKnown RBP22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 PKP3Q9Y446 797 aa22.79■■□□□ 1.24
TRIOBP-203ENST00000403663 BPIP17213 487 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms