RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 KCNE2Q9Y6J6 123 aa13.66□□□□□ -0.22
HDDC2-202ENST00000398153 FAM208BQ5VWN6 2430 aa13.66□□□□□ -0.22
HDDC2-202ENST00000398153 LOC400499M0QZD8 3231 aa13.66□□□□□ -0.22
HDDC2-202ENST00000398153 SPTBP11277 2137 aa13.66□□□□□ -0.22
HDDC2-202ENST00000398153 ANKRD12Q6UB98 2062 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 HYKKA2RU49 373 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 H0YGG7 62 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 H7BY64 318 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 ATXN7O15265 892 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-202ENST00000398153 KATNA1O75449 491 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 ALBP02768 609 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 CAPN1P07384 714 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 LTA4HP09960 611 aaKnown RBP13.65□□□□□ -0.22
HDDC2-202ENST00000398153 SFTPCP11686 197 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 GGT5P36269 586 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 MSH2P43246 934 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 SERPINB8P50452 374 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 CCR8P51685 355 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 PMS2P54278 862 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 VSX2P58304 361 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-202ENST00000398153 ARF3P61204 181 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-202ENST00000398153 YBX1P67809 324 aaKnown RBP13.65□□□□□ -0.22
HDDC2-202ENST00000398153 CDC20Q12834 499 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 EFTUD2Q15029 972 aaKnown RBP eCLIP13.65□□□□□ -0.22
HDDC2-202ENST00000398153 NCF4Q15080 339 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 FAM83EQ2M2I3 478 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 ZXDCQ2QGD7 858 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-202ENST00000398153 MUM1Q2TAK8 710 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 PRTGQ2VWP7 1150 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 NKAIN1Q4KMZ8 207 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 TAF1BQ53T94 588 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-202ENST00000398153 MROH9Q5TGP6 573 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 SULT1C3Q6IMI6 304 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 FRMPD2BQ6IN97 320 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 FAM199XQ6PEV8 388 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-202ENST00000398153 ADCK2Q7Z695 626 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 GPSM1Q86YR5 675 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 OR4K1Q8NGD4 311 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 RHEBL1Q8TAI7 183 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 THAP4Q8WY91 577 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 ISL2Q96A47 359 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 FKBP10Q96AY3 582 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 NACC2Q96BF6 587 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 RHBDF1Q96CC6 855 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 PRAP1Q96NZ9 151 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 ACTL8Q9H568 366 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 GPN3Q9UHW5 284 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-202ENST00000398153 IKZF3Q9UKT9 509 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 CDC14AQ9UNH5 594 aa13.65□□□□□ -0.22
HDDC2-202ENST00000398153 SEC16AO15027 2179 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 LOC105369274A0A096LPK9 316 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 LOC102723532A0A0G2JNH3 316 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 HMX2A2RU54 273 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 ESPNB1AK53 854 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 NKX2-8O15522 239 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 PRPF4O43172 522 aaKnown RBP eCLIP13.64□□□□□ -0.232e-12■■■□□ 16.2
HDDC2-202ENST00000398153 ALAS2P22557 587 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 TYK2P29597 1187 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 CSNK1G2P78368 415 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 FAM53BQ14153 422 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 CSHL1Q14406 222 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 UAP1Q16222 522 aaPredicted RBP13.64□□□□□ -0.23
HDDC2-202ENST00000398153 UGT8Q16880 541 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 PTCHD3Q3KNS1 767 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 KLC3Q6P597 504 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 BORAQ6PGQ7 559 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 FAM198BQ6UWH4 519 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 TTLL10Q6ZVT0 673 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 ISCA2Q86U28 154 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 THOC6Q86W42 341 aaKnown RBP13.64□□□□□ -0.23
HDDC2-202ENST00000398153 OR4N4Q8N0Y3 316 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 PDPRQ8NCN5 879 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 PYCR2Q96C36 320 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 IP6K3Q96PC2 410 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 PAFAH2Q99487 392 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 TXLNGYQ9BZA5 131 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 SLC26A1Q9H2B4 701 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 WDR54Q9H977 334 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 SNX15Q9NRS6 342 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 ABCF3Q9NUQ8 709 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 CUEDC1Q9NWM3 386 aaPredicted RBP13.64□□□□□ -0.23
HDDC2-202ENST00000398153 IFT80Q9P2H3 777 aaPredicted RBP13.64□□□□□ -0.23
HDDC2-202ENST00000398153 DHCR7Q9UBM7 475 aaKnown RBP13.64□□□□□ -0.23
HDDC2-202ENST00000398153 NDOR1Q9UHB4 597 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 TCFL5Q9UL49 500 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 POLHQ9Y253 713 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 DYRK1BQ9Y463 629 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 IGSF10Q6WRI0 2623 aa13.64□□□□□ -0.23
HDDC2-202ENST00000398153 EXOC1LA0A1B0GW35 172 aa13.63□□□□□ -0.23
HDDC2-202ENST00000398153 SYCE1LA8MT33 242 aa13.63□□□□□ -0.23
HDDC2-202ENST00000398153 HAT1O14929 419 aa13.63□□□□□ -0.23
HDDC2-202ENST00000398153 RIPK2O43353 540 aa13.63□□□□□ -0.23
HDDC2-202ENST00000398153 KLHL2O95198 593 aa13.63□□□□□ -0.23
HDDC2-202ENST00000398153 ALDOAP04075 364 aaKnown RBP13.63□□□□□ -0.23
HDDC2-202ENST00000398153 S100BP04271 92 aaPredicted RBP13.63□□□□□ -0.23
HDDC2-202ENST00000398153 EIF2S1P05198 315 aaKnown RBP13.63□□□□□ -0.23
HDDC2-202ENST00000398153 C2P06681 752 aa13.63□□□□□ -0.23
HDDC2-202ENST00000398153 CTSBP07858 339 aa13.63□□□□□ -0.23
HDDC2-202ENST00000398153 COL6A2P12110 1019 aa13.63□□□□□ -0.23
HDDC2-202ENST00000398153 GNAZP19086 355 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms