RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CYTH2Q99418 400 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 SELENOSQ9BQE4 189 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 MCMBPQ9BTE3 642 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 ACAT2Q9BWD1 397 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 SLC25A18Q9H1K4 315 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 MRPS30Q9NP92 439 aaKnown RBP13.96□□□□□ -0.17
SEC13-208ENST00000397109 SMYD2Q9NRG4 433 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 GPN3Q9UHW5 284 aaPredicted RBP13.96□□□□□ -0.17
SEC13-208ENST00000397109 TCFL5Q9UL49 500 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 SNX7Q9UNH6 387 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 PADI2Q9Y2J8 665 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 KCNMB2Q9Y691 235 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 HEATR5BQ9P2D3 2071 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 ANKRD12Q6UB98 2062 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 OR2A25A4D2G3 310 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 B8ZZF3 427 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 E7ENX8 843 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 CAPN1P07384 714 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 FURINP09958 794 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 PIM1P11309 404 aaPredicted RBP13.95□□□□□ -0.18
SEC13-208ENST00000397109 IL2P60568 153 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 RPS18P62269 152 aaKnown RBP13.95□□□□□ -0.18
SEC13-208ENST00000397109 ABATP80404 500 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 TAP2Q03519 686 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 PRDX1Q06830 199 aaKnown RBP13.95□□□□□ -0.18
SEC13-208ENST00000397109 TSTA3Q13630 321 aaPredicted RBP13.95□□□□□ -0.18
SEC13-208ENST00000397109 NCF4Q15080 339 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 FAM214AQ32MH5 1076 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 KBTBD12Q3ZCT8 623 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 HECTD2Q5U5R9 776 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 ADGRD1Q6QNK2 874 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 SUSD1Q6UWL2 747 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 TTC29Q8NA56 475 aaPredicted RBP13.95□□□□□ -0.18
SEC13-208ENST00000397109 UHMK1Q8TAS1 419 aaKnown RBP13.95□□□□□ -0.18
SEC13-208ENST00000397109 ZBTB9Q96C00 473 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 CCDC138Q96M89 665 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 DPH7Q9BTV6 452 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 EPN3Q9H201 632 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 CCDC134Q9H6E4 229 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 PARVBQ9HBI1 364 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 SSU72Q9NP77 194 aaKnown RBP13.95□□□□□ -0.18
SEC13-208ENST00000397109 STARD5Q9NSY2 213 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 MAN2B2Q9Y2E5 1009 aa13.95□□□□□ -0.18
SEC13-208ENST00000397109 PABPN1LA6NDY0 278 aaKnown RBP13.94□□□□□ -0.18
SEC13-208ENST00000397109 CXorf49A8MYA2 514 aaPredicted RBP13.94□□□□□ -0.18
SEC13-208ENST00000397109 CTSVO60911 334 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 CTSBP07858 339 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 LSP1P33241 339 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 COL9A2Q14055 689 aaPredicted RBP13.94□□□□□ -0.18
SEC13-208ENST00000397109 NKAIN1Q4KMZ8 207 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 C1orf189Q5VU69 101 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 ICE2Q659A1 982 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 RNF44Q7L0R7 432 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 STRA8Q7Z7C7 330 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 ZNF605Q86T29 641 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 APLFQ8IW19 511 aaPredicted RBP13.94□□□□□ -0.18
SEC13-208ENST00000397109 ALKBH8Q96BT7 664 aaKnown RBP13.94□□□□□ -0.18
SEC13-208ENST00000397109 LINGO1Q96FE5 620 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 ZFYVE21Q9BQ24 234 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 PLCD4Q9BRC7 762 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 PCBD2Q9H0N5 130 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 IFT80Q9P2H3 777 aaPredicted RBP13.94□□□□□ -0.18
SEC13-208ENST00000397109 SLC17A6Q9P2U8 582 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 PSMC3IPQ9P2W1 217 aaPredicted RBP13.94□□□□□ -0.18
SEC13-208ENST00000397109 DHCR7Q9UBM7 475 aaKnown RBP13.94□□□□□ -0.18
SEC13-208ENST00000397109 NDOR1Q9UHB4 597 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 TAC3Q9UHF0 121 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 PSAT1Q9Y617 370 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 FER1L5A0AVI2 2057 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 CFAP46Q8IYW2 2715 aa13.94□□□□□ -0.18
SEC13-208ENST00000397109 A0A1B0GX78 115 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 FITM1A5D6W6 292 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 FAM155BO75949 473 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 HIST1H2AGP0C0S8 130 aaPredicted RBP13.93□□□□□ -0.18
SEC13-208ENST00000397109 HIST1H2ADP20671 130 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 ALAS2P22557 587 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 FDXRP22570 491 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 HRH2P25021 359 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 IMPA1P29218 277 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 SLCO1A2P46721 670 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 GCGRP47871 477 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 VSX2P58304 361 aaPredicted RBP13.93□□□□□ -0.18
SEC13-208ENST00000397109 RELAQ04206 551 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 NFATC3Q12968 1075 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 LGSNQ5TDP6 509 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 THEMIS2Q5TEJ8 643 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 MLIPQ5VWP3 458 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 ZC3HC1Q86WB0 502 aaKnown RBP13.93□□□□□ -0.18
SEC13-208ENST00000397109 C9orf43Q8TAL5 461 aaPredicted RBP13.93□□□□□ -0.18
SEC13-208ENST00000397109 PDLIM5Q96HC4 596 aaKnown RBP13.93□□□□□ -0.18
SEC13-208ENST00000397109 HIST1H2AHQ96KK5 128 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 CPNE1Q99829 537 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 HIST1H2AJQ99878 128 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 H2AFJQ9BTM1 129 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 TRIM54Q9BYV2 358 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 SLC6A20Q9NP91 592 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 CUTCQ9NTM9 273 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 ZNF180Q9UJW8 692 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 PDE10AQ9Y233 779 aa13.93□□□□□ -0.18
SEC13-208ENST00000397109 ZNF462Q96JM2 2506 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms