RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 AIF1LQ9BQI0 150 aa13.11□□□□□ -0.31
GAPDH-204ENST00000396859 TMEM79Q9BSE2 394 aa13.11□□□□□ -0.31
GAPDH-204ENST00000396859 NLNQ9BYT8 704 aa13.11□□□□□ -0.31
GAPDH-204ENST00000396859 PELI2Q9HAT8 420 aa13.11□□□□□ -0.31
GAPDH-204ENST00000396859 WDR70Q9NW82 654 aa13.11□□□□□ -0.31
GAPDH-204ENST00000396859 FOXJ2Q9P0K8 574 aa13.11□□□□□ -0.31
GAPDH-204ENST00000396859 TMEM216Q9P0N5 145 aa13.11□□□□□ -0.31
GAPDH-204ENST00000396859 MID2Q9UJV3 735 aa13.11□□□□□ -0.31
GAPDH-204ENST00000396859 AP1M2Q9Y6Q5 423 aa13.11□□□□□ -0.31
GAPDH-204ENST00000396859 IGKV1-8A0A0C4DH67 115 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 STX16-NPEPL1H3BU86 382 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 TXNDC9O14530 226 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 STX16O14662 325 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 KLK8O60259 260 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 CPNE3O75131 537 aaKnown RBP13.1□□□□□ -0.31
GAPDH-204ENST00000396859 KATNA1O75449 491 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 STK17BO94768 372 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 KIAA0754O94854 1291 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 MTHFD2P13995 350 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 EPB42P16452 691 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 CXCR2P25025 360 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 CRHR1P34998 444 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 ATP1A2P50993 1020 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 VSX2P58304 361 aaPredicted RBP13.1□□□□□ -0.31
GAPDH-204ENST00000396859 YBX1P67809 324 aaKnown RBP13.1□□□□□ -0.31
GAPDH-204ENST00000396859 ZXDCQ2QGD7 858 aaPredicted RBP13.1□□□□□ -0.31
GAPDH-204ENST00000396859 FBXO48Q5FWF7 155 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 PWWP2BQ6NUJ5 590 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 METTL2BQ6P1Q9 378 aaKnown RBP13.1□□□□□ -0.31
GAPDH-204ENST00000396859 C16orf46Q6P387 395 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 NXPE4Q6UWF7 544 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 C4orf33Q8N1A6 199 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 ZNF655Q8N720 491 aaPredicted RBP13.1□□□□□ -0.31
GAPDH-204ENST00000396859 PTGR2Q8N8N7 351 aaPredicted RBP13.1□□□□□ -0.31
GAPDH-204ENST00000396859 CCDC63Q8NA47 563 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 ZNF248Q8NDW4 579 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 ABHD11Q8NFV4 315 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 PMEPA1Q969W9 287 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 ESAMQ96AP7 390 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 CLIP3Q96DZ5 547 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 PHF21BQ96EK2 531 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 THAP11Q96EK4 314 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 OR4K3Q96R72 315 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 NDC1Q9BTX1 674 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 TMEM121BQ9BXQ6 578 aaPredicted RBP13.1□□□□□ -0.31
GAPDH-204ENST00000396859 PRM3Q9NNZ6 103 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 ACSL6Q9UKU0 697 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 SRPK3Q9UPE1 567 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 PCDHB3Q9Y5E6 796 aa13.1□□□□□ -0.31
GAPDH-204ENST00000396859 FOXO6A8MYZ6 492 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 HAT1O14929 419 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 ZSCAN9O15535 394 aaPredicted RBP13.09□□□□□ -0.31
GAPDH-204ENST00000396859 RRP8O43159 456 aaKnown RBP13.09□□□□□ -0.31
GAPDH-204ENST00000396859 CTSVO60911 334 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 EIF2S1P05198 315 aaKnown RBP13.09□□□□□ -0.31
GAPDH-204ENST00000396859 C1GALT1C1LP0DN25 315 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 LIPCP11150 499 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 EEF1DP29692 281 aaKnown RBP13.09□□□□□ -0.31
GAPDH-204ENST00000396859 GABRA4P48169 554 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 AGTR2P50052 363 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 ARSFP54793 590 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 CSNK1G2P78368 415 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 SLC18A2Q05940 514 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 CASP8Q14790 479 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 GRM7Q14831 915 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 PCBP2Q15366 365 aaKnown RBP eCLIP13.09□□□□□ -0.315e-7■■■■■ 27.1
GAPDH-204ENST00000396859 HIST2H2ACQ16777 129 aaPredicted RBP13.09□□□□□ -0.31
GAPDH-204ENST00000396859 HIST2H2AA3Q6FI13 130 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 SLC22A9Q8IVM8 553 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 KRT78Q8N1N4 520 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 TEX9Q8N6V9 391 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 SNIP1Q8TAD8 396 aaKnown RBP13.09□□□□□ -0.31
GAPDH-204ENST00000396859 KCNE4Q8WWG9 221 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 CCDC126Q96EE4 140 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 APOPT1Q96IL0 206 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 ACTR5Q9H9F9 607 aaPredicted RBP13.09□□□□□ -0.31
GAPDH-204ENST00000396859 TXLNGQ9NUQ3 528 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 MKS1Q9NXB0 559 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 PILRAQ9UKJ1 303 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 SH2B3Q9UQQ2 575 aa13.09□□□□□ -0.31
GAPDH-204ENST00000396859 TMEM184BQ9Y519 407 aaPredicted RBP13.09□□□□□ -0.31
GAPDH-204ENST00000396859 SNRNP200O75643 2136 aaKnown RBP13.09□□□□□ -0.31
GAPDH-204ENST00000396859 TRBC2A0A5B9 178 aa13.08□□□□□ -0.32
GAPDH-204ENST00000396859 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.08□□□□□ -0.32
GAPDH-204ENST00000396859 ZNF749O43361 778 aa13.08□□□□□ -0.32
GAPDH-204ENST00000396859 OR1F1O43749 312 aa13.08□□□□□ -0.32
GAPDH-204ENST00000396859 RAD1O60671 282 aa13.08□□□□□ -0.32
GAPDH-204ENST00000396859 NTRK1P04629 796 aa13.08□□□□□ -0.32
GAPDH-204ENST00000396859 KLK3P07288 261 aaPredicted RBP13.08□□□□□ -0.32
GAPDH-204ENST00000396859 CCNYL3P0C7X3 344 aa13.08□□□□□ -0.32
GAPDH-204ENST00000396859 MYL2P10916 166 aa13.08□□□□□ -0.32
GAPDH-204ENST00000396859 ATP5F1P24539 256 aaPredicted RBP13.08□□□□□ -0.32
GAPDH-204ENST00000396859 ARL1P40616 181 aaPredicted RBP13.08□□□□□ -0.32
GAPDH-204ENST00000396859 IRF8Q02556 426 aa13.08□□□□□ -0.32
GAPDH-204ENST00000396859 LAPTM5Q13571 262 aa13.08□□□□□ -0.32
GAPDH-204ENST00000396859 MAP7Q14244 749 aa13.08□□□□□ -0.32
GAPDH-204ENST00000396859 FAM214AQ32MH5 1076 aa13.08□□□□□ -0.32
GAPDH-204ENST00000396859 XKR6Q5GH73 641 aa13.08□□□□□ -0.32
GAPDH-204ENST00000396859 PAGE2BQ5JRK9 111 aa13.08□□□□□ -0.32
GAPDH-204ENST00000396859 WASHC2DQ5SRD0 308 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms