RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 GSTM2P28161 218 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 PTGER1P34995 402 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 NKG7Q16617 165 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 TXNDC8Q6A555 127 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 RELTQ969Z4 430 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 CARS2Q9HA77 564 aaKnown RBP12.84□□□□□ -0.35
NFKB1-202ENST00000394820 ZIM2Q9NZV7 527 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 SAMD4AQ9UPU9 718 aaKnown RBP12.84□□□□□ -0.35
NFKB1-202ENST00000394820 LYVE1Q9Y5Y7 322 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 ZW10O43264 779 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 IL12RB1P42701 662 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 ZNF33AQ06730 810 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 DSC1Q08554 894 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 ST3GAL4Q11206 333 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 CHRNA6Q15825 494 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 ZSWIM7Q19AV6 140 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 PTCHD3Q3KNS1 767 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 SYCE2Q6PIF2 218 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 PRR23CQ6ZRP0 262 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 CNTN4Q8IWV2 1026 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 ZFP41Q8N8Y5 198 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 CHPT1Q8WUD6 406 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 TMEM246Q9BRR3 403 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 DERL2Q9GZP9 239 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 MMP28Q9H239 520 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 NKIRAS2Q9NYR9 191 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 CLCA3PQ9Y6N3 262 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 MAGEB17A8MXT2 336 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 HNRNPCL2B2RXH8 293 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 M0QX08 132 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 TLL1O43897 1013 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 HTRA3P83110 453 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 GPR17Q13304 367 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 CASP12Q6UXS9 341 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 TRMT11Q7Z4G4 463 aaKnown RBP12.83□□□□□ -0.36
NFKB1-202ENST00000394820 DDX53Q86TM3 631 aaKnown RBP12.83□□□□□ -0.36
NFKB1-202ENST00000394820 UXS1Q8NBZ7 420 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 PDPRQ8NCN5 879 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 OR4A15Q8NGL6 344 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 FEVQ99581 238 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 BEX1Q9HBH7 125 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 KLHL1Q9NR64 748 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 SLCO3A1Q9UIG8 710 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 INTS6Q9UL03 887 aaKnown RBP12.83□□□□□ -0.36
NFKB1-202ENST00000394820 H0YJX3 145 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 MYL12BO14950 172 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 SYN3O14994 580 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 KLKB1P03952 638 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 ANXA4P09525 319 aaPredicted RBP12.83□□□□□ -0.36
NFKB1-202ENST00000394820 GGT1P19440 569 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 HOXD10P28358 340 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 HK3P52790 923 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 VEPH1Q14D04 833 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 TRIQKQ629K1 86 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 CYHR1Q6ZMK1 362 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 TMPRSS11BQ86T26 416 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 MYDGFQ969H8 173 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 PPP1R14BQ96C90 147 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 L3HYPDHQ96EM0 354 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 TMEM169Q96HH4 297 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 DEFB118Q96PH6 123 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 UGT2A1Q9Y4X1 527 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 FAM92AA1XBS5 289 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 CCDC182A6NF36 153 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 OR6C70A6NIJ9 312 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 H0YAE9 185 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 SLC28A1O00337 649 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 RFPL2O75678 378 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 YBEYP58557 167 aaPredicted RBP12.83□□□□□ -0.36
NFKB1-202ENST00000394820 RPS26P62854 115 aaKnown RBP12.83□□□□□ -0.36
NFKB1-202ENST00000394820 RACK1P63244 317 aaKnown RBP12.83□□□□□ -0.36
NFKB1-202ENST00000394820 KBTBD8Q8NFY9 601 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 BCL7CQ8WUZ0 217 aaPredicted RBP12.83□□□□□ -0.36
NFKB1-202ENST00000394820 STARD8Q92502 1023 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 FOXJ1Q92949 421 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 SMG9Q9H0W8 520 aaKnown RBP12.83□□□□□ -0.36
NFKB1-202ENST00000394820 ZNF385DQ9H6B1 395 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 RPS6KA6Q9UK32 745 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 BPTFQ12830 3046 aa12.83□□□□□ -0.36
NFKB1-202ENST00000394820 H7C4K7 107 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 DLGAP1O14490 977 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 TGFB1P01137 390 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 PDYNP01213 254 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 HOXC13P31276 330 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 CDKN2CP42773 168 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 SLC15A1P46059 708 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 USP41Q3LFD5 358 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 SDE2Q6IQ49 451 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 CYP2U1Q7Z449 544 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 ZBTB2Q8N680 514 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 IRF2BPLQ9H1B7 796 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 FZD4Q9ULV1 537 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 GLYATL1P3A0A0U1RQE8 302 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.82□□□□□ -0.36
NFKB1-202ENST00000394820 A0A1B0GVC2 190 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 A6NIN4 97 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 PRAMEF12O95522 483 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 GP2P55259 537 aaKnown RBP12.82□□□□□ -0.36
NFKB1-202ENST00000394820 ELP6Q0PNE2 266 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 CARD16Q5EG05 197 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms