RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 PCMTD2Q9NV79 361 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 DYRK1BQ9Y463 629 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 LOC105369274A0A096LPK9 316 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 LOC102723532A0A0G2JNH3 316 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 H0YGG7 62 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 K7ENP7 123 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 ZZEF1O43149 2961 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 EIF2S1P05198 315 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 CDH1P12830 882 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 AGXTP21549 392 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 GCAP28676 217 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 RORAP35398 523 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 GRK3P35626 688 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 MAGEA12P43365 314 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 KCNC1P48547 511 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 ARF3P61204 181 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 ACAP2Q15057 778 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 FAM214AQ32MH5 1076 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 YOD1Q5VVQ6 348 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 RHBDD2Q6NTF9 364 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 FAM199XQ6PEV8 388 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 INO80CQ6PI98 192 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 OR4N4Q8N0Y3 316 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 RHEBL1Q8TAI7 183 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 RERGQ96A58 199 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 OR4K3Q96R72 315 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 DPH2Q9BQC3 489 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 AKIRIN1Q9H9L7 192 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 ENAMQ9NRM1 1142 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 WWOXQ9NZC7 414 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 KCND3Q9UK17 655 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 CROTQ9UKG9 612 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 SLC22A14Q9Y267 594 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 KCNE2Q9Y6J6 123 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 LAMA5O15230 3695 aa18.18■□□□□ 0.5
PDLIM7-204ENST00000393546 ZFHX4Q86UP3 3567 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 DSPP15924 2871 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 PTPRQQ9UMZ3 2332 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 IQANK1A0A1B0GTG1 560 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 FITM1A5D6W6 292 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 SYCE1LA8MT33 242 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 HAT1O14929 419 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 KERAO60938 352 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 COL6A2P12110 1019 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 ALAS2P22557 587 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 GGT5P36269 586 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 CCR8P51685 355 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 RPS15AP62244 130 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 CSNK1G2P78368 415 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 ARHGAP40Q5TG30 622 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 TIFABQ6ZNK6 161 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 KLHDC8AQ8IYD2 350 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 ABHD11Q8NFV4 315 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 PROKR1Q8TCW9 393 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 CT55Q8WUE5 264 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 SLC5A11Q8WWX8 675 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 EXT2Q93063 718 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 CABS1Q96KC9 395 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 TSNARE1Q96NA8 513 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 OR2A5Q96R48 311 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 ATOH8Q96SQ7 321 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 PRORYQ9H606 182 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 STARD5Q9NSY2 213 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 NUDT4Q9NZJ9 180 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 PSMC3IPQ9P2W1 217 aaPredicted RBP18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 SH2B3Q9UQQ2 575 aa18.17■□□□□ 0.5
PDLIM7-204ENST00000393546 SUPT3HB4E1H0 165 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 C21orf140B9A014 251 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 TXNDC9O14530 226 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 TAPBPO15533 448 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 KATNA1O75449 491 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 SUPT3HO75486 399 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 IPO13O94829 963 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 WDR47O94967 919 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 GDF5P43026 501 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 SLC6A12P48065 614 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 GLRBP48167 497 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 RPS15P62841 145 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 DNASE1L3Q13609 305 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 C18orf21Q32NC0 220 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 C1orf189Q5VU69 101 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 EMBQ6PCB8 327 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 ZNF517Q6ZMY9 492 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 TTLL10Q6ZVT0 673 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 GPR155Q7Z3F1 870 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 PLD3Q8IV08 490 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 TBC1D19Q8N5T2 526 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 PDPRQ8NCN5 879 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 THAP11Q96EK4 314 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 CRELD1Q96HD1 420 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 SLC45A3Q96JT2 553 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 GPR78Q96P69 363 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 CAPS2Q9BXY5 557 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 GPR87Q9BY21 358 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 PARD6BQ9BYG5 372 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 CHST8Q9H2A9 424 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 PPCSQ9HAB8 311 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 CUTCQ9NTM9 273 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 DHCR7Q9UBM7 475 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 NDOR1Q9UHB4 597 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms