RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 PTERQ96BW5 349 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 HIST1H2AHQ96KK5 128 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 C10orf90Q96M02 699 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 TSNARE1Q96NA8 513 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZNF285Q96NJ3 590 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 FMO2Q99518 471 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 HIST1H2AJQ99878 128 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 EGFL8Q99944 293 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 H2AFJQ9BTM1 129 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 EFHD1Q9BUP0 239 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 SGPP1Q9BX95 441 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 SPNS1Q9H2V7 528 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 CUTCQ9NTM9 273 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 IFT80Q9P2H3 777 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 CTNNAL1Q9UBT7 734 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 MTRF1LQ9UGC7 380 aaKnown RBP7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 KCND3Q9UK17 655 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 TCFL5Q9UL49 500 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 NFU1Q9UMS0 254 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 SNX7Q9UNH6 387 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 RUVBL1Q9Y265 456 aaKnown RBP7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 FARSAQ9Y285 508 aaKnown RBP7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 MRPS2Q9Y399 296 aaKnown RBP7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 PCDHGA6Q9Y5G7 932 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 KLK4Q9Y5K2 254 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 AP1M2Q9Y6Q5 423 aa7.33□□□□□ -1.24
HMGB3P1-201ENST00000393368 PCSK5Q92824 1860 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 A0A1B0GX78 115 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 HYKKA2RU49 373 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 HMX2A2RU54 273 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 ARGFXA6NJG6 315 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 EIF4E1BA6NMX2 242 aaKnown RBP7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 C9J4A7 227 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 DSCR3O14972 297 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 KLF7O75840 302 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 CCNDBP1O95273 360 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 FKBP9O95302 570 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 ITGB2P05107 769 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 ENO2P09104 434 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 HBQ1P09105 142 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 FAM153BP0C7A2 387 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 SLC35E2BP0CK96 405 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 EZRP15311 586 aaKnown RBP7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 CD1DP15813 335 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 STMN1P16949 149 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 NR1D1P20393 614 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 OTX2P32243 289 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 SPRP35270 261 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 BCL6P41182 706 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 GDF5P43026 501 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 RAB10P61026 200 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 CSNK1G2P78368 415 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 ABATP80404 500 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 DCDP81605 110 aaKnown RBP7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 DLG1Q12959 904 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 CSHL1Q14406 222 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 GRM7Q14831 915 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZKSCAN8Q15776 578 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 UGT8Q16880 541 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 FAM153CQ494X1 144 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 NKAIN1Q4KMZ8 207 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 GLE1Q53GS7 698 aaKnown RBP7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 TCTE1Q5JU00 501 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 CATSPEREQ5SY80 951 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 MROH9Q5TGP6 573 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 CAPN13Q6MZZ7 669 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 RAPH1Q70E73 1250 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 FRA10AC1Q70Z53 315 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 CYS1Q717R9 158 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 VN1R4Q7Z5H5 301 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 C17orf64Q86WR6 236 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 PRSS58Q8IYP2 241 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 NKAPQ8N5F7 415 aaKnown RBP7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZNF740Q8NDX6 193 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 OR56A3Q8NH54 315 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 PROKR1Q8TCW9 393 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 ESAMQ96AP7 390 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 FBXL8Q96CD0 374 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 TSPAN17Q96FV3 270 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 PDLIM5Q96HC4 596 aaKnown RBP7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 CABS1Q96KC9 395 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 OR2A5Q96R48 311 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 MESP1Q9BRJ9 268 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 GPR87Q9BY21 358 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 NLNQ9BYT8 704 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 TRIM55Q9BYV6 548 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 DERL2Q9GZP9 239 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 SOX17Q9H6I2 414 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 POPDC3Q9HBV1 291 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 ANKMY1Q9P2S6 941 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 CTSFQ9UBX1 484 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 GPN3Q9UHW5 284 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 SRPK3Q9UPE1 567 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 MAN2B2Q9Y2E5 1009 aa7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 PTRH2Q9Y3E5 179 aaKnown RBP7.32□□□□□ -1.24
HMGB3P1-201ENST00000393368 FITM1A5D6W6 292 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 K7EM74 188 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 TAPBPO15533 448 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 LCMT2O60294 686 aaKnown RBP7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 SRPX2O60687 465 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms