RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 OR4D10Q8NGI6 311 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 CCDC107Q8WV48 283 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 POF1BQ8WVV4 589 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 KCNE4Q8WWG9 221 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 NABP1Q96AH0 204 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 C8orf48Q96LL4 319 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 OR6C1Q96RD1 312 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 DNAI2Q9GZS0 605 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 TRPV4Q9HBA0 871 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 ZNF331Q9NQX6 463 aaPredicted RBP0.28□□□□□ -2.36
SNORA40-201ENST00000388090 PCDHB16Q9NRJ7 776 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP0.28□□□□□ -2.36
SNORA40-201ENST00000388090 PILRAQ9UKJ1 303 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 MRPS18CQ9Y3D5 142 aaKnown RBP0.28□□□□□ -2.36
SNORA40-201ENST00000388090 SALL1Q9NSC2 1324 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 NID2Q14112 1375 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 ARHGAP23Q9P227 1491 aa0.28□□□□□ -2.37
SNORA40-201ENST00000388090 TRIM49D1C9J1S8 452 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 SSX4O60224 188 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 OR10H2O60403 315 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 NDUFS3O75489 264 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 HCKP08631 526 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 IFIT1P09914 478 aaKnown RBP0.27□□□□□ -2.37
SNORA40-201ENST00000388090 GDF1P27539 372 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 ICAM3P32942 547 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 GNALP38405 381 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 SLC1A4P43007 532 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 OLR1P78380 273 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 MEF2BQ02080 365 aaPredicted RBP0.27□□□□□ -2.37
SNORA40-201ENST00000388090 LMOD3Q0VAK6 560 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 SGCGQ13326 291 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 TRIM14Q14142 442 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 TGIF1Q15583 401 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 ALDH1L2Q3SY69 923 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 OTPQ5XKR4 325 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 ANO1Q5XXA6 986 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 FCRLAQ7L513 359 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 SYVN1Q86TM6 617 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 MYLK4Q86YV6 388 aaPredicted RBP0.27□□□□□ -2.37
SNORA40-201ENST00000388090 CPOQ8IVL8 374 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 OR6F1Q8NGZ6 308 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 MOSPD2Q8NHP6 518 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 CHURC1Q8WUH1 139 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 WDFY2Q96P53 400 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 DPAGT1Q9H3H5 408 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 TMEM9Q9P0T7 183 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 AMACRQ9UHK6 382 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 SPATA2Q9UM82 520 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 MRPL11Q9Y3B7 192 aaKnown RBP0.27□□□□□ -2.37
SNORA40-201ENST00000388090 MTF2Q9Y483 593 aaPredicted RBP0.27□□□□□ -2.37
SNORA40-201ENST00000388090 R4GN57 208 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 KDM3AQ9Y4C1 1321 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 SLIT3O75094 1523 aa0.27□□□□□ -2.37
SNORA40-201ENST00000388090 MDN1Q9NU22 5596 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 B4DXG7 233 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 F5H423 210 aaPredicted RBP0.26□□□□□ -2.37
SNORA40-201ENST00000388090 RNF103O00237 685 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 O00370 1275 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 ERAL1O75616 437 aaKnown RBP0.26□□□□□ -2.37
SNORA40-201ENST00000388090 RHBDL1O75783 438 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 BAIAP3O94812 1187 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 IGKV4-1P06312 121 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 TBPP20226 339 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 EFNA3P52797 238 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 MOBPQ13875 183 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 TRIM29Q14134 588 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 EIF4A2Q14240 407 aaKnown RBP0.26□□□□□ -2.37
SNORA40-201ENST00000388090 GPR68Q15743 365 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 CCNG2Q16589 344 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 CA9Q16790 459 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 SPICE1Q8N0Z3 855 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 OR2AJ1Q8NGZ0 328 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 FAM149B1Q96BN6 582 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 INTS12Q96CB8 462 aaKnown RBP0.26□□□□□ -2.37
SNORA40-201ENST00000388090 FAM20AQ96MK3 541 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 MCCC1Q96RQ3 725 aaPredicted RBP0.26□□□□□ -2.37
SNORA40-201ENST00000388090 GAD1Q99259 594 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 CCDC3Q9BQI4 270 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 GPR63Q9BZJ6 419 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 MTMR12Q9C0I1 747 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 STRADBQ9C0K7 418 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 POLR1BQ9H9Y6 1135 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 ITM2CQ9NQX7 267 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 ZNF346Q9UL40 294 aaKnown RBP0.26□□□□□ -2.37
SNORA40-201ENST00000388090 PCDHGA5Q9Y5G8 931 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 CYP46A1Q9Y6A2 500 aa0.26□□□□□ -2.37
SNORA40-201ENST00000388090 MUC5BQ9HC84 5762 aaPredicted RBP0.25□□□□□ -2.37
SNORA40-201ENST00000388090 ASTN1O14525 1302 aa0.25□□□□□ -2.37
SNORA40-201ENST00000388090 FRG2CA6NGY1 282 aa0.25□□□□□ -2.37
SNORA40-201ENST00000388090 ANKRD63C9JTQ0 380 aa0.25□□□□□ -2.37
SNORA40-201ENST00000388090 SLC1A7O00341 560 aa0.25□□□□□ -2.37
SNORA40-201ENST00000388090 EEF2KO00418 725 aaKnown RBP0.25□□□□□ -2.37
SNORA40-201ENST00000388090 MTRF1O75570 445 aaKnown RBP0.25□□□□□ -2.37
SNORA40-201ENST00000388090 ATP1B1P05026 303 aa0.25□□□□□ -2.37
SNORA40-201ENST00000388090 JAK1P23458 1154 aa0.25□□□□□ -2.37
SNORA40-201ENST00000388090 CHKAP35790 457 aa0.25□□□□□ -2.37
SNORA40-201ENST00000388090 RARSP54136 660 aaKnown RBP0.25□□□□□ -2.37
SNORA40-201ENST00000388090 GALCP54803 685 aa0.25□□□□□ -2.37
SNORA40-201ENST00000388090 ARL4CP56559 192 aa0.25□□□□□ -2.37
SNORA40-201ENST00000388090 FUT7Q11130 342 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms