RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ZNF45Q02386 682 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 KIAA1614Q5VZ46 1190 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 LHX8Q68G74 356 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 CRIPAKQ8N1N5 446 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 PJA1Q8NG27 643 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 FBXO32Q969P5 355 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 CCDC120Q96HB5 630 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 RPRD1AQ96P16 312 aaPredicted RBP13.45□□□□□ -0.26
SDC1-202ENST00000381150 SLC30A2Q9BRI3 323 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 CCNB1IP1Q9NPC3 277 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 FAM8A1Q9UBU6 413 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 MEIOCA2RUB1 952 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 S100A3P33764 101 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 ACVRL1P37023 503 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 HK3P52790 923 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 ZXDBP98169 803 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 NFKB2Q00653 900 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 IL10RBQ08334 325 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 PRSS48Q7RTY5 328 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 LACC1Q8IV20 430 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 TRIM63Q969Q1 353 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 CDKN2AIPNLQ96HQ2 116 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 BRINP2Q9C0B6 783 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 LATS2Q9NRM7 1088 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 DCAF13Q9NV06 445 aaKnown RBP13.45□□□□□ -0.26
SDC1-202ENST00000381150 PEX16Q9Y5Y5 336 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 CCDC182A6NF36 153 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 OR6C75A6NL08 312 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 SNX4O95219 450 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 PTHP01270 115 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 OPN1SWP03999 348 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 CCNYL3P0C7X3 344 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 UQCRC1P31930 480 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 TGFBR2P37173 567 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 GATMP50440 423 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 TIAL1Q01085 375 aaKnown RBP eCLIP13.44□□□□□ -0.262e-7■■■■■ 33.2
SDC1-202ENST00000381150 ACVR1Q04771 509 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 GPR17Q13304 367 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 SIGIRRQ6IA17 410 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 GLT6D1Q7Z4J2 308 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 ZNF605Q86T29 641 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 CFAP52Q8N1V2 620 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 TSPEARQ8WU66 669 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.44□□□□□ -0.26
SDC1-202ENST00000381150 PDFQ9HBH1 243 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 THUMPD1Q9NXG2 353 aaKnown RBP13.44□□□□□ -0.26
SDC1-202ENST00000381150 RGS13O14921 159 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 SLC16A6O15403 523 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 RPP40O75818 363 aaKnown RBP13.44□□□□□ -0.26
SDC1-202ENST00000381150 STC1P52823 247 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 P2RX3P56373 397 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 TUBA1BP68363 451 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 VLDLRP98155 873 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 RING1Q06587 406 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 ELP6Q0PNE2 266 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 CAMK2GQ13555 558 aaPredicted RBP13.44□□□□□ -0.26
SDC1-202ENST00000381150 DDX39BQ13838 428 aaKnown RBP13.44□□□□□ -0.26
SDC1-202ENST00000381150 STARD3Q14849 445 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 C5orf22Q49AR2 442 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 FAM131AQ6UXB0 335 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 TUBA1AQ71U36 451 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 C7orf57Q8NEG2 295 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 TMEM203Q969S6 136 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 FAM193BQ96PV7 902 aaPredicted RBP13.44□□□□□ -0.26
SDC1-202ENST00000381150 CCSER2Q9H7U1 834 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 TLR8Q9NR97 1041 aaKnown RBP13.44□□□□□ -0.26
SDC1-202ENST00000381150 OLA1Q9NTK5 396 aaKnown RBP13.44□□□□□ -0.26
SDC1-202ENST00000381150 WWOXQ9NZC7 414 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 DUSP12Q9UNI6 340 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 LYVE1Q9Y5Y7 322 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 A0A1W2PQ45 241 aaPredicted RBP13.44□□□□□ -0.26
SDC1-202ENST00000381150 A0A1W2PQY0 241 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 A8MX80 341 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 FAM25AB3EWG3 89 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 FAM25CB3EWG5 89 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 FAM25GB3EWG6 89 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 TMCC2O75069 709 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 ULK1O75385 1050 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 ALDH1A1P00352 501 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 GLUD1P00367 558 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 VCANP13611 3396 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 CBLP22681 906 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 SP3Q02447 781 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 ST3GAL4Q11206 333 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 NPRL3Q12980 569 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 UAP1L1Q3KQV9 507 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 C10orf120Q5SQS8 335 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 LPCAT1Q8NF37 534 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 GPR151Q8TDV0 419 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 TP53INP1Q96A56 240 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 ISG20Q96AZ6 181 aaKnown RBP13.44□□□□□ -0.26
SDC1-202ENST00000381150 MAP6Q96JE9 813 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 ELAC1Q9H777 363 aaKnown RBP13.44□□□□□ -0.26
SDC1-202ENST00000381150 GORASP2Q9H8Y8 452 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 MUTYHQ9UIF7 546 aa13.44□□□□□ -0.26
SDC1-202ENST00000381150 TET1Q8NFU7 2136 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 M0R082 166 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 RFXANKO14593 260 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 FABP3P05413 133 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 RPS17P08708 135 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms