RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 AVPR2P30518 371 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 GRIA2P42262 883 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 RPL5P46777 297 aaKnown RBP10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 SH3BGRP55822 239 aaPredicted RBP10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 PHEXP78562 749 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 MYBPC1Q00872 1141 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 FOXK2Q01167 660 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 HIST2H2ACQ16777 129 aaPredicted RBP10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 RNF220Q5VTB9 566 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 HIST2H2AA3Q6FI13 130 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 KRT80Q6KB66 452 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 MED27Q6P2C8 311 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 VITQ6UXI7 678 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 TMEM184AQ6ZMB5 413 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 EPHX4Q8IUS5 362 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 CFAP206Q8IYR0 622 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 CBR4Q8N4T8 237 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 OR8J2Q8NGG1 315 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 OR9A1PQ8NGU1 263 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 OR10A6Q8NH74 314 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 CLHC1Q8NHS4 586 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 SETD7Q8WTS6 366 aaKnown RBP10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 TFAP2CQ92754 450 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 UBE2E3Q969T4 207 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 CXorf40BQ96DE9 158 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 FAM120BQ96EK7 910 aaKnown RBP10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 COX14Q96I36 57 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 RNF145Q96MT1 663 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 TSSK3Q96PN8 268 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 CHID1Q9BWS9 393 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 SGPP1Q9BX95 441 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 MAGIXQ9H6Y5 334 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 KAT8Q9H7Z6 458 aaKnown RBP10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 PRSS16Q9NQE7 514 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 SERHLQ9NQF3 203 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 ATXN10Q9UBB4 475 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 TSC22D4Q9Y3Q8 395 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 PCDHB14Q9Y5E9 798 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 FADS3Q9Y5Q0 445 aa10.13□□□□□ -0.79
POLR2J3-201ENST00000379340 DMDP11532 3685 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 NCOR2Q9Y618 2525 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 ARHGAP10A1A4S6 786 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 OTOL1A6NHN0 477 aaPredicted RBP10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 EVPLLA8MZ36 301 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 GPR89AB7ZAQ6 455 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 FOXE1O00358 373 aaPredicted RBP10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 CXCR6O00574 342 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 RFXANKO14593 260 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 ACOX3O15254 700 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 CLOCKO15516 846 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 TPST1O60507 370 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 KAT7O95251 611 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 CLPTM1O96005 669 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 RPN2P04844 631 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 APODP05090 189 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 EPHX1P07099 455 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 GPR89BP0CG08 455 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 PPIBP23284 216 aaKnown RBP10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 MYF6P23409 242 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 PDHA2P29803 388 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 GJA4P35212 333 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 P2RY2P41231 377 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 IL12RB1P42701 662 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 METAP1P53582 386 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 TBPL1P62380 186 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 MESP2Q0VG99 397 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 APOFQ13790 326 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 AGERQ15109 404 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 DUOXA1Q1HG43 343 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 PGS1Q32NB8 556 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 TANGO2Q6ICL3 276 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 ERICH5Q6P6B1 374 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 SLCO4C1Q6ZQN7 724 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 CAMKMTQ7Z624 323 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 MMAAQ8IVH4 418 aaKnown RBP10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 SYTL1Q8IYJ3 562 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 LILRA3Q8N6C8 439 aaPredicted RBP10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 ZNF480Q8WV37 535 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 FAM162AQ96A26 154 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 C11orf24Q96F05 449 aaPredicted RBP10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 REXO5Q96IC2 774 aaKnown RBP10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 OR4K3Q96R72 315 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 SEPHS2Q99611 448 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 PRPF18Q99633 342 aaKnown RBP10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 ADI1Q9BV57 179 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 SPATA9Q9BWV2 254 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 GULP1Q9UBP9 304 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 PPT2Q9UMR5 302 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 OAZ3Q9UMX2 235 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 USP22Q9UPT9 525 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 CORO2BQ9UQ03 480 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 AP1M2Q9Y6Q5 423 aa10.12□□□□□ -0.79
POLR2J3-201ENST00000379340 EPG5Q9HCE0 2579 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 FAM149AA5PLN7 773 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 K7ESM1 405 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 PI15O43692 258 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 POP7O75817 140 aaKnown RBP10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 ADH1BP00325 375 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 HPRP00739 348 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 C1GALT1C1LP0DN25 315 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms