RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TC2NQ8N9U0 490 aa16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 PPHLN1Q8NEY8 458 aaKnown RBP16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 CHTF18Q8WVB6 975 aa16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 METTL21AQ8WXB1 218 aa16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 ATG4AQ8WYN0 398 aa16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 RERGQ96A58 199 aaPredicted RBP16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 HES7Q9BYE0 225 aa16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 RNF32Q9H0A6 362 aa16.86■□□□□ 0.29
PDLIM4-202ENST00000379018 TCRBV7S2A1N4TA0A589 114 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 NPIPA5E9PKD4 350 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 TTI1O43156 1089 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 CLDN14O95500 239 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 C8orf89P0DMQ9 161 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 CCNFP41002 786 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 KIR3DL1P43629 444 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 EFNA3P52797 238 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 AP2B1P63010 937 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 TBX2Q13207 712 aaPredicted RBP16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 MINDY4Q4G0A6 757 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 LANCL3Q6ZV70 420 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 PRUNE1Q86TP1 453 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 PLCD4Q9BRC7 762 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 TUBB6Q9BUF5 446 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 DRC3Q9H069 523 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 SPATA7Q9P0W8 599 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 TAC3Q9UHF0 121 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 PCYOX1Q9UHG3 505 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 NPIPA1Q9UND3 350 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 KLK4Q9Y5K2 254 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 MRFAP1Q9Y605 127 aa16.85■□□□□ 0.29
PDLIM4-202ENST00000379018 LOC102723996A0A087X1L8 192 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 SOWAHDA6NJG2 315 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 CD3EAPO15446 510 aaKnown RBP16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 P2RX6O15547 441 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 FOXS1O43638 330 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 NDUFS3O75489 264 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 ICAM2P13598 275 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 SLC26A3P40879 764 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 TTPAP49638 278 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 ALDH6A1Q02252 535 aaKnown RBP16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 TLE4Q04727 773 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 ACVR1Q04771 509 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 NAA25Q14CX7 972 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 C3P1Q6ZMU1 363 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 PLD3Q8IV08 490 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 PPFIBP2Q8ND30 876 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 HMGCLL1Q8TB92 370 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 MAGEC3Q8TD91 643 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 MVB12AQ96EY5 273 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 MRFAP1L1Q96HT8 127 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 SIGLEC12Q96PQ1 595 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 AMFRQ9UKV5 643 aa16.84■□□□□ 0.29
PDLIM4-202ENST00000379018 A0A1W2PQ72 361 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 GRID2IPA4D2P6 1211 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 ERI2A8K979 691 aaKnown RBP16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 ETS1P14921 441 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 ABOP16442 354 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 SESN2P58004 480 aaPredicted RBP16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 CRADDP78560 199 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 GTF3C1Q12789 2109 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 TMEM205Q6UW68 189 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 PEX26Q7Z412 305 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 PAQR7Q86WK9 346 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 CCDC170Q8IYT3 715 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 SHISA5Q8N114 240 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 SLC35B2Q8TB61 432 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 ADAMTS18Q8TE60 1221 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 IMMP1LQ96LU5 166 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 GPR137Q96N19 417 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 VN1R1Q9GZP7 353 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 KCNK13Q9HB14 408 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 GPAMQ9HCL2 828 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 CHRAC1Q9NRG0 131 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 IGSF5Q9NSI5 407 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 SCN3AQ9NY46 2000 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 RIMKLBQ9ULI2 386 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 MEMO1Q9Y316 297 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 ZFHX3Q15911 3703 aa16.83■□□□□ 0.28
PDLIM4-202ENST00000379018 IGKV1-8A0A0C4DH67 115 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 OR2W5A6NFC9 320 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 ARHGEF33A8MVX0 844 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 KPNA5O15131 536 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 NIPSNAP2O75323 286 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 IPO7O95373 1038 aaKnown RBP16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 FTCDO95954 541 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 FMO4P31512 558 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 FDFT1P37268 417 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 SNRPNP63162 240 aaKnown RBP16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 HSF1Q00613 529 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 TUBA3CQ13748 450 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 OR1C1Q15619 314 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 CTSL3PQ5NE16 218 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 ACER2Q5QJU3 275 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 TUBA3EQ6PEY2 450 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 CPEB2Q7Z5Q1 589 aaKnown RBP16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 SPPL2CQ8IUH8 684 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 UBL4BQ8N7F7 174 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 OR9A1PQ8NGU1 263 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 OR9A4Q8NGU2 314 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms