RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 CROCCP2Q86T23 111 aa12.69□□□□□ -0.38
CKAP2-202ENST00000378034 NLGN4XQ8N0W4 816 aa12.69□□□□□ -0.38
CKAP2-202ENST00000378034 TBC1D19Q8N5T2 526 aa12.69□□□□□ -0.38
CKAP2-202ENST00000378034 ESX1Q8N693 406 aa12.69□□□□□ -0.38
CKAP2-202ENST00000378034 NLGN4YQ8NFZ3 816 aaPredicted RBP12.69□□□□□ -0.38
CKAP2-202ENST00000378034 HNRNPLLQ8WVV9 542 aaKnown RBP12.69□□□□□ -0.38
CKAP2-202ENST00000378034 SARGQ9BW04 601 aa12.69□□□□□ -0.38
CKAP2-202ENST00000378034 PELI2Q9HAT8 420 aa12.69□□□□□ -0.38
CKAP2-202ENST00000378034 DNAJC11Q9NVH1 559 aa12.69□□□□□ -0.38
CKAP2-202ENST00000378034 ZNF358Q9NW07 568 aa12.69□□□□□ -0.38
CKAP2-202ENST00000378034 SRPK3Q9UPE1 567 aa12.69□□□□□ -0.38
CKAP2-202ENST00000378034 TNPO3Q9Y5L0 923 aaKnown RBP12.69□□□□□ -0.38
CKAP2-202ENST00000378034 SDK2Q58EX2 2172 aa12.69□□□□□ -0.38
CKAP2-202ENST00000378034 A0A087WV48 116 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 A0A0J9YVX5 310 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 A0A1W2PPM1 405 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 TXNDC9O14530 226 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 ZSCAN9O15535 394 aaPredicted RBP12.68□□□□□ -0.38
CKAP2-202ENST00000378034 RAD1O60671 282 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 TIAF1O95411 115 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 CDH1P12830 882 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 GFAPP14136 432 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 ZNF28P17035 718 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 HSPA7P48741 367 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 ARSFP54793 590 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 CDC16Q13042 620 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 SETDB1Q15047 1291 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 SH2D5Q6ZV89 423 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 CYP4X1Q8N118 509 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 NEIL2Q969S2 332 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 OR2A5Q96R48 311 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 SPRTNQ9H040 489 aaPredicted RBP12.68□□□□□ -0.38
CKAP2-202ENST00000378034 ACTR5Q9H9F9 607 aaPredicted RBP12.68□□□□□ -0.38
CKAP2-202ENST00000378034 XPR1Q9UBH6 696 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 SH2B3Q9UQQ2 575 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 RAXQ9Y2V3 346 aa12.68□□□□□ -0.38
CKAP2-202ENST00000378034 FITM1A5D6W6 292 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 HAT1O14929 419 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 CTIFO43310 598 aaKnown RBP12.67□□□□□ -0.38
CKAP2-202ENST00000378034 ZNF749O43361 778 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 SMIM24O75264 130 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 CCNYL3P0C7X3 344 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 GDF5P43026 501 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 CCT5P48643 541 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 EMP3P54852 163 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 ABHD18Q0P651 414 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 CLN3Q13286 438 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 GRM7Q14831 915 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 PDK4Q16654 411 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 PFKFB4Q16877 469 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 C18orf21Q32NC0 220 aaPredicted RBP12.67□□□□□ -0.38
CKAP2-202ENST00000378034 NXPE4Q6UWF7 544 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 CACNA2D3Q8IZS8 1091 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 IQCKQ8N0W5 287 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 TTC29Q8NA56 475 aaPredicted RBP12.67□□□□□ -0.38
CKAP2-202ENST00000378034 NKD1Q969G9 470 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 RERGQ96A58 199 aaPredicted RBP12.67□□□□□ -0.38
CKAP2-202ENST00000378034 DPH2Q9BQC3 489 aaPredicted RBP12.67□□□□□ -0.38
CKAP2-202ENST00000378034 FAM117AQ9C073 453 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 SLC7A5P2Q9GIP4 190 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 EHD1Q9H4M9 534 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 IRAK4Q9NWZ3 460 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 ZMIZ1Q9ULJ6 1067 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 SSUH2Q9Y2M2 353 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 H0YGG7 62 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 STX16-NPEPL1H3BU86 382 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 GOLGA8RI6L899 631 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 K7EPI3 171 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 STX16O14662 325 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 CLGNO14967 610 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 CCNT2O60583 730 aaKnown RBP12.67□□□□□ -0.38
CKAP2-202ENST00000378034 GLRA3O75311 464 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 H2AFYO75367 372 aaKnown RBP12.67□□□□□ -0.38
CKAP2-202ENST00000378034 NTRK1P04629 796 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 KLK3P07288 261 aaPredicted RBP12.67□□□□□ -0.38
CKAP2-202ENST00000378034 CXCR2P25025 360 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 VSX2P58304 361 aaPredicted RBP12.67□□□□□ -0.38
CKAP2-202ENST00000378034 ARF3P61204 181 aaPredicted RBP12.67□□□□□ -0.38
CKAP2-202ENST00000378034 PCBP2Q15366 365 aaKnown RBP eCLIP12.67□□□□□ -0.38
CKAP2-202ENST00000378034 FAM214AQ32MH5 1076 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 WASHC2DQ5SRD0 308 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 FRMPD2BQ6IN97 320 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 RHBDD2Q6NTF9 364 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 TIPARPQ7Z3E1 657 aaKnown RBP12.67□□□□□ -0.38
CKAP2-202ENST00000378034 GALNT6Q8NCL4 622 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 CLIP3Q96DZ5 547 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 NDC1Q9BTX1 674 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 PITHD1Q9GZP4 211 aaPredicted RBP12.67□□□□□ -0.38
CKAP2-202ENST00000378034 CPSF2Q9P2I0 782 aaKnown RBP12.67□□□□□ -0.38
CKAP2-202ENST00000378034 OPTCQ9UBM4 332 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 PADI1Q9ULC6 663 aa12.67□□□□□ -0.38
CKAP2-202ENST00000378034 ACACBO00763 2458 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 LOC105369274A0A096LPK9 316 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 LOC102723532A0A0G2JNH3 316 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 TRBC2A0A5B9 178 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 NRP2O60462 931 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 C1GALT1C1LP0DN25 315 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 TAC1P20366 129 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 CRHR1P34998 444 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 GCGRP47871 477 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms