RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 EPN2O95208 641 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 EPORP19235 508 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 PRPH2P23942 346 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 ETV6P41212 452 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 IQCCQ4KMZ1 466 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 SOWAHCQ53LP3 525 aaPredicted RBP20.49■□□□□ 0.87
UPF3A-202ENST00000375299 ZSWIM9Q86XI8 627 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 CPA6Q8N4T0 437 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 TP53INP1Q96A56 240 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 CMTM7Q96FZ5 175 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 PANX1Q96RD7 426 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 OR2B2Q9GZK3 357 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 AMBNQ9NP70 447 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 EHD3Q9NZN3 535 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 SPASTQ9UBP0 616 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 PNMA8CA0A1B0GUJ8 204 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 CLDN11O75508 207 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 KRT75O95678 551 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 ADORA3P0DMS8 318 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 CTPS1P17812 591 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 LIMK1P53667 647 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 UGT2B15P54855 530 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 ABRQ12979 859 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 MTAPQ13126 283 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 GPRC6AQ5T6X5 926 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.49■□□□□ 0.87
UPF3A-202ENST00000375299 ZNF598Q86UK7 904 aaKnown RBP20.49■□□□□ 0.87
UPF3A-202ENST00000375299 LILRB4Q8NHJ6 448 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 APIPQ96GX9 242 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 REXO4Q9GZR2 422 aaKnown RBP20.49■□□□□ 0.87
UPF3A-202ENST00000375299 NUAK2Q9H093 628 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 ELOVL6Q9H5J4 265 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 ZNF221Q9UK13 617 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 PCDHB9Q9Y5E1 797 aa20.49■□□□□ 0.87
UPF3A-202ENST00000375299 VWA8A3KMH1 1905 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 ANKRD34BA5PLL1 514 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 GAPDHSO14556 408 aaPredicted RBP20.48■□□□□ 0.87
UPF3A-202ENST00000375299 ARF5P84085 180 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 CTXN3Q4LDR2 81 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 RNF19BQ6ZMZ0 732 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 GPR155Q7Z3F1 870 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 TPD52L3Q96J77 140 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 C7orf34Q96L11 122 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 COL21A1Q96P44 957 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 RAD9AQ99638 391 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 DPH2Q9BQC3 489 aaPredicted RBP20.48■□□□□ 0.87
UPF3A-202ENST00000375299 CENPOQ9BU64 300 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 SLC32A1Q9H598 525 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 ASB8Q9H765 288 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 LATS2Q9NRM7 1088 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 SNX6Q9UNH7 406 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 SCAMP3O14828 347 aaKnown RBP20.48■□□□□ 0.87
UPF3A-202ENST00000375299 ZW10O43264 779 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 RPLP2P05387 115 aaKnown RBP20.48■□□□□ 0.87
UPF3A-202ENST00000375299 ANXA5P08758 320 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 ZDHHC11BP0C7U3 371 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 SLC11A2P49281 568 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 CLPPQ16740 277 aaPredicted RBP20.48■□□□□ 0.87
UPF3A-202ENST00000375299 Q96MT0 163 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 CHCHD6Q9BRQ6 235 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 LYVE1Q9Y5Y7 322 aa20.48■□□□□ 0.87
UPF3A-202ENST00000375299 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.47■□□□□ 0.87
UPF3A-202ENST00000375299 FAM172BPA6NC97 362 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 A6NL46 340 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 MAGEB17A8MXT2 336 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 LOC110117498-PIK3R3F6TDL0 507 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 INPPL1O15357 1258 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 FZD6O60353 706 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 ALPIP09923 528 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 RRM2P31350 389 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 OR1G1P47890 313 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 PXNP49023 591 aaPredicted RBP20.47■□□□□ 0.87
UPF3A-202ENST00000375299 SGSHP51688 502 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 ARPP19P56211 112 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 ZNF177Q13360 481 aaPredicted RBP20.47■□□□□ 0.87
UPF3A-202ENST00000375299 ARMCX4Q5H9R4 360 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 SPANXN2Q5MJ10 180 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 ZNF544Q6NX49 715 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 LINGO4Q6UY18 593 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 ZNF621Q6ZSS3 439 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 PIK3R3Q92569 461 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 APOLD1Q96LR9 279 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 SEPT5Q99719 369 aaPredicted RBP20.47■□□□□ 0.87
UPF3A-202ENST00000375299 TTPALQ9BTX7 342 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 CEP44Q9C0F1 390 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 ABCG8Q9H221 673 aa20.47■□□□□ 0.87
UPF3A-202ENST00000375299 TRMT13Q9NUP7 481 aaKnown RBP20.47■□□□□ 0.87
UPF3A-202ENST00000375299 PRG3Q9Y2Y8 225 aaPredicted RBP20.47■□□□□ 0.87
UPF3A-202ENST00000375299 NUP214P35658 2090 aaPredicted RBP20.47■□□□□ 0.87
UPF3A-202ENST00000375299 KCNE1BA0A087WTH5 132 aa20.46■□□□□ 0.87
UPF3A-202ENST00000375299 TMEM189-UBE2V1I3L0A0 370 aa20.46■□□□□ 0.87
UPF3A-202ENST00000375299 SSX4O60224 188 aa20.46■□□□□ 0.87
UPF3A-202ENST00000375299 CD160O95971 181 aa20.46■□□□□ 0.87
UPF3A-202ENST00000375299 DNTTP04053 509 aa20.46■□□□□ 0.87
UPF3A-202ENST00000375299 COL6A1P12109 1028 aa20.46■□□□□ 0.87
UPF3A-202ENST00000375299 CYBAP13498 195 aa20.46■□□□□ 0.87
UPF3A-202ENST00000375299 PCSK2P16519 638 aa20.46■□□□□ 0.87
UPF3A-202ENST00000375299 RGS6P49758 472 aa20.46■□□□□ 0.87
UPF3A-202ENST00000375299 VEZF1Q14119 521 aa20.46■□□□□ 0.87
UPF3A-202ENST00000375299 GGTA1PQ4G0N0 100 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms