RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 DLX3O60479 287 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 NMBRP28336 390 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 AGAP6Q5VW22 663 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 SAPCD2Q86UD0 394 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 BPIFB1Q8TDL5 484 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF486Q96H40 463 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 AGAP4Q96P64 663 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 LIPT1Q9Y234 373 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 SULT1B1O43704 296 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 ATP5A1P25705 553 aaKnown RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 WDR53Q7Z5U6 358 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-204ENST00000375290 OR8D1Q8WZ84 308 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 IL4I1Q96RQ9 567 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 CD180Q99467 661 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 COMMD3Q9UBI1 195 aa9.93□□□□□ -0.82
PTCH1-204ENST00000375290 GTPBP1O00178 669 aaKnown RBP9.92□□□□□ -0.82
PTCH1-204ENST00000375290 WNT10BO00744 389 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 TOR1BO14657 336 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF286BP0CG31 522 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 TYRP14679 529 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 DNASE1L1P49184 302 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 DUSP28Q4G0W2 176 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 PRAMEF17Q5VTA0 474 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 PCDHAC1Q9H158 963 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 CNOT2Q9NZN8 540 aaKnown RBP9.92□□□□□ -0.82
PTCH1-204ENST00000375290 RGS17Q9UGC6 210 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-204ENST00000375290 ENPP5Q9UJA9 477 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 N4BP2Q86UW6 1770 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-204ENST00000375290 SCN11AQ9UI33 1791 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 GIMD1P0DJR0 217 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 IL7RP16871 459 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 ACVR2AP27037 513 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 IGFALSP35858 605 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 CCR4P51679 360 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 BTN3A2P78410 334 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 CD83Q01151 205 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 MYLK3Q32MK0 819 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 MTFMTQ96DP5 389 aaKnown RBP9.92□□□□□ -0.82
PTCH1-204ENST00000375290 ARL5BQ96KC2 179 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 FZD8Q9H461 694 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 ZDHHC6Q9H6R6 413 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 RBMX2Q9Y388 322 aaKnown RBP9.92□□□□□ -0.82
PTCH1-204ENST00000375290 MANSC4A6NHS7 340 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-204ENST00000375290 SOCS5O75159 536 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 ITGB1P05556 798 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 AZGP1P25311 298 aaKnown RBP9.92□□□□□ -0.82
PTCH1-204ENST00000375290 CMPK1P30085 196 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 CHST9Q7L1S5 443 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 COQ9O75208 318 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 ADAP00813 363 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 POMCP01189 267 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 NELFEP18615 380 aaKnown RBP9.92□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF81P51508 661 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 TCEAL6Q6IPX3 200 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 HS3ST5Q8IZT8 346 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 EFCAB3Q8N7B9 438 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 TFAP2CQ92754 450 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 PIWIL1Q96J94 861 aaKnown RBP9.92□□□□□ -0.82
PTCH1-204ENST00000375290 OR51E2Q9H255 320 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 TAS2R3Q9NYW6 316 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 HCN3Q9P1Z3 774 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 RB1P06400 928 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 MSX2P35548 267 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-204ENST00000375290 NPAS3Q8IXF0 933 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 MALT1Q9UDY8 824 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 AMHP03971 560 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 PGDP52209 483 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 GDF10P55107 478 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 VEZF1Q14119 521 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 LY6KQ17RY6 165 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 RAET1GQ6H3X3 334 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 NANOGP8Q6NSW7 305 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 OR4C15Q8NGM1 316 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 NANOGQ9H9S0 305 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 SMURF1Q9HCE7 757 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 ASAH2Q9NR71 780 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 CNTNAP1P78357 1384 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 TEX13CA0A0J9YWL9 993 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 ABL2P42684 1182 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 METTL11BQ5VVY1 283 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 UGT2A3Q6UWM9 527 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 PAQR7Q86WK9 346 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 C1orf216Q8TAB5 229 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 KIAA1143Q96AT1 154 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-204ENST00000375290 PWWP2AQ96N64 755 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 C2orf71A6NGG8 1288 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 TISP43B9A030 160 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 OR4F21O95013 312 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 PCDH8O95206 1070 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 AK1P00568 194 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 RFX3P48380 749 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 BTG3Q14201 252 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF678Q5SXM1 525 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 SLC27A4Q6P1M0 643 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 PGBD2Q6P3X8 592 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF782Q6ZMW2 699 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-204ENST00000375290 LACC1Q8IV20 430 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 KIAA0319LQ8IZA0 1049 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 BBS10Q8TAM1 723 aa9.92□□□□□ -0.82
PTCH1-204ENST00000375290 PFDN5Q99471 154 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms