RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 AP3S2P59780 193 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 C1QTNF8P60827 252 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 ATG9BQ674R7 924 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 FAM171BQ6P995 826 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 TPRG1Q6ZUI0 275 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 OR4C6Q8NH72 309 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 TNFAIP8L1Q8WVP5 186 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 TRUB1Q8WWH5 349 aaKnown RBP11.23□□□□□ -0.61
PTCH1-203ENST00000375274 BRI3BPQ8WY22 251 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 CMTM7Q96FZ5 175 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 OR2AG1Q9H205 316 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 ZNF224Q9NZL3 707 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 OR6C70A6NIJ9 312 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 OR1I1O60431 355 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 REM1O75628 298 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 EPHX1P07099 455 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 KELP23276 732 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 EDNRBP24530 442 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 ITPKBP27987 946 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 AKR1D1P51857 326 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 DCDC1P59894 354 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 SH3BP2P78314 561 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 WSCD2Q2TBF2 565 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 CARD16Q5EG05 197 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 MBOAT1Q6ZNC8 495 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 RANBP3LQ86VV4 465 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-203ENST00000375274 CADM2Q8N3J6 435 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 AQP11Q8NBQ7 271 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 PCBD2Q9H0N5 130 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 IGFLR1Q9H665 355 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 NFKBIL1Q9UBC1 381 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-203ENST00000375274 PHRF1Q9P1Y6 1649 aaKnown RBP11.22□□□□□ -0.61
PTCH1-203ENST00000375274 GLTPD2A6NH11 291 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 CCL16O15467 120 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 KDELR3O43731 214 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 MAGEA6P43360 314 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 CDKN2DP55273 166 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 CYBRD1Q53TN4 286 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 ADNP2Q6IQ32 1131 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 KIAA1161Q6NSJ0 714 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 FRRS1Q6ZNA5 592 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 GPRIN1Q7Z2K8 1008 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 AHCYL2Q96HN2 611 aaKnown RBP11.22□□□□□ -0.61
PTCH1-203ENST00000375274 MYRFLQ96LU7 910 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 SLC29A1Q99808 456 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 KCNH6Q9H252 994 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 PFDN2Q9UHV9 154 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 DAPL1A0PJW8 107 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 EEDO75530 441 aaKnown RBP11.22□□□□□ -0.61
PTCH1-203ENST00000375274 HPRP00739 348 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 GALNT1Q10472 559 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-203ENST00000375274 COQ5Q5HYK3 327 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 CLEC12AQ5QGZ9 265 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 PLPP4Q5VZY2 271 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 AGTRAPQ6RW13 159 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 RPTNQ6XPR3 784 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 RASSF6Q6ZTQ3 369 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 ISCA2Q86U28 154 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 THOC6Q86W42 341 aaKnown RBP11.22□□□□□ -0.61
PTCH1-203ENST00000375274 ARNTL2Q8WYA1 636 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 LGALS12Q96DT0 336 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 ANKRD60Q9BZ19 345 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 HCN4Q9Y3Q4 1203 aa11.22□□□□□ -0.61
PTCH1-203ENST00000375274 COL14A1Q05707 1796 aaKnown RBP11.22□□□□□ -0.61
PTCH1-203ENST00000375274 AKAP8O43823 692 aaKnown RBP11.21□□□□□ -0.61
PTCH1-203ENST00000375274 CHRNA1P02708 482 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 S100A9P06702 114 aaKnown RBP11.21□□□□□ -0.61
PTCH1-203ENST00000375274 KLK1P06870 262 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 ATP1B2P14415 290 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-203ENST00000375274 MYF6P23409 242 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 KHKP50053 298 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 CD83Q01151 205 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 NFATC3Q12968 1075 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 GPR17Q13304 367 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 AKIRIN2Q53H80 203 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 GDF6Q6KF10 455 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-203ENST00000375274 FAM43BQ6ZT52 329 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-203ENST00000375274 NUDT13Q86X67 352 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 IFNLR1Q8IU57 520 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-203ENST00000375274 NFKBIDQ8NI38 313 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 TMIGD2Q96BF3 282 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 ALPK1Q96QP1 1244 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 UCK2Q9BZX2 261 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 PCDHGA7Q9Y5G6 932 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 CITO14578 2027 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 CICQ96RK0 1608 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-203ENST00000375274 FBP2O00757 339 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 HMGN1P05114 100 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 BCHEP06276 602 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 SLC35G6P0C7Q6 338 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 CSTF1Q05048 431 aaKnown RBP11.21□□□□□ -0.61
PTCH1-203ENST00000375274 PTGES3Q15185 160 aaKnown RBP11.21□□□□□ -0.61
PTCH1-203ENST00000375274 ZNF630Q2M218 657 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-203ENST00000375274 ZNF792Q3KQV3 632 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 UGT2A3Q6UWM9 527 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 CEACAM20Q6UY09 585 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 RANBP10Q6VN20 620 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 SCML4Q8N228 414 aa11.21□□□□□ -0.61
PTCH1-203ENST00000375274 RIOK2Q9BVS4 552 aaKnown RBP11.21□□□□□ -0.61
PTCH1-203ENST00000375274 A0A1W2PQ72 361 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms