RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 NME3Q13232 169 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 RUNX3Q13761 415 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 THOC5Q13769 683 aaKnown RBP4.41□□□□□ -1.7
PMS1-202ENST00000374826 PON2Q15165 354 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 PDGFRLQ15198 375 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 CDO1Q16878 200 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 RAB6CQ53S08 254 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 EFHC1Q5JVL4 640 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 TMEM31Q5JXX7 168 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 ATG9BQ674R7 924 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 C8orf82Q6P1X6 216 aaPredicted RBP4.41□□□□□ -1.7
PMS1-202ENST00000374826 DNAJC24Q6P3W2 148 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 TPGS1Q6ZTW0 290 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 MON1BQ7L1V2 547 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 SLC26A9Q7LBE3 791 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 PHF13Q86YI8 300 aaPredicted RBP4.41□□□□□ -1.7
PMS1-202ENST00000374826 SUGP1Q8IWZ8 645 aaKnown RBP4.41□□□□□ -1.7
PMS1-202ENST00000374826 CCDC105Q8IYK2 499 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 TMEM105Q8N8V8 129 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 ZNF397Q8NF99 534 aaPredicted RBP4.41□□□□□ -1.7
PMS1-202ENST00000374826 JOSD2Q8TAC2 188 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 TMEM163Q8TC26 289 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 ZNF653Q96CK0 615 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 KTI12Q96EK9 354 aaPredicted RBP4.41□□□□□ -1.7
PMS1-202ENST00000374826 CFAP57Q96MR6 1250 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 SERPINB11Q96P15 392 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 MCEEQ96PE7 176 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 GFM1Q96RP9 751 aaKnown RBP4.41□□□□□ -1.7
PMS1-202ENST00000374826 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.41□□□□□ -1.7
PMS1-202ENST00000374826 BBS2Q9BXC9 721 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 C1QTNF1Q9BXJ1 281 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 KRTAP4-4Q9BYR3 166 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 EDEM3Q9BZQ6 932 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 RAB6CQ9H0N0 254 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 C6orf106Q9H6K1 298 aaPredicted RBP4.41□□□□□ -1.7
PMS1-202ENST00000374826 ECT2Q9H8V3 914 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 POPDC2Q9HBU9 364 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 DDIT4Q9NX09 232 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 AIPL1Q9NZN9 384 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 ADAM22Q9P0K1 906 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 IL36RNQ9UBH0 155 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 XPO7Q9UIA9 1087 aaKnown RBP4.41□□□□□ -1.7
PMS1-202ENST00000374826 ERRFI1Q9UJM3 462 aaPredicted RBP4.41□□□□□ -1.7
PMS1-202ENST00000374826 DHDHQ9UQ10 334 aa4.41□□□□□ -1.7
PMS1-202ENST00000374826 HBS1LQ9Y450 684 aaKnown RBP4.41□□□□□ -1.7
PMS1-202ENST00000374826 MTF2Q9Y483 593 aaPredicted RBP4.41□□□□□ -1.7
PMS1-202ENST00000374826 CNOT1A5YKK6 2376 aaKnown RBP4.41□□□□□ -1.7
PMS1-202ENST00000374826 PLXNB3Q9ULL4 1909 aa4.4□□□□□ -1.7
PMS1-202ENST00000374826 GPR179Q6PRD1 2367 aa4.4□□□□□ -1.7
PMS1-202ENST00000374826 A0A087WYN8 130 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 A0A087X0T9 212 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 GOLGA6L7A0A1B0GV03 622 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 KANSL1LA0AUZ9 987 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 ANTXRLA6NF34 631 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 C17orf100A8MU93 164 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 AKR1B15C9JRZ8 316 aaPredicted RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 PI15O43692 258 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 TSPAN3O60637 253 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 EGFP01133 1207 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 IGLV3-25P01717 112 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 IGLV3-27P01718 113 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 APOEP02649 317 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 CALB1P05937 261 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 FAM228BP0C875 321 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 GLULP15104 373 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 AOC1P19801 751 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 RRM1P23921 792 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 OPRD1P41143 372 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 MATKP42679 507 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 HARS2P49590 506 aaKnown RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 NUMBP49757 651 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 SGSHP51688 502 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 ART1P52961 327 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 NUDT6P53370 316 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 STARD6P59095 220 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 GFPT1Q06210 699 aaPredicted RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 TBX2Q13207 712 aaPredicted RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 BYSLQ13895 437 aaKnown RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 IZUMO4Q1ZYL8 232 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 C15orf59Q2T9L4 293 aaPredicted RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 FAM133BQ5BKY9 247 aaKnown RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 ACAD10Q6JQN1 1059 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 JMJD6Q6NYC1 403 aaPredicted RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 RFWD3Q6PCD5 774 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 RHBDF2Q6PJF5 856 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 WDR59Q6PJI9 974 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 ZNF852Q6ZMS4 543 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 Q6ZS52 159 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 VPS36Q86VN1 386 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 RALGPS2Q86X27 583 aaPredicted RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 TMEM25Q86YD3 366 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 MCOLN2Q8IZK6 566 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 TC2NQ8N9U0 490 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 SPC24Q8NBT2 197 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 OR8K1Q8NGG5 319 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 OR14A16Q8NHC5 309 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 RXFP2Q8WXD0 754 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 FAM3CQ92520 227 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 RUBCNQ92622 972 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 SYN2Q92777 582 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms