RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ZNF432O94892 652 aa16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 CSF2P04141 144 aa16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 NIPAL4Q0D2K0 466 aa16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 CHRNA6Q15825 494 aa16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 ZNF181Q2M3W8 571 aa16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 CYBRD1Q53TN4 286 aa16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 UBXN11Q5T124 520 aa16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 CLDN19Q8N6F1 224 aa16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 LGALS12Q96DT0 336 aa16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 PRICKLE1Q96MT3 831 aaPredicted RBP16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 ZNF382Q96SR6 550 aa16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 WACQ9BTA9 647 aa16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 ERVK-18Q9QC07 812 aa16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 MRTO4Q9UKD2 239 aaKnown RBP16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 HCN4Q9Y3Q4 1203 aa16.68■□□□□ 0.26
PTP4A1-201ENST00000370651 LDOC1O95751 146 aaPredicted RBP16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 DHRS4L1P0CG22 281 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 DNASE1L1P49184 302 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 IQCHQ86VS3 1027 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 C1orf216Q8TAB5 229 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 ZNF431Q8TF32 576 aaPredicted RBP16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 TMEM80Q96HE8 168 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 SMOQ99835 787 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 SEC14L4Q9UDX3 406 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 A0A075B6Q4 140 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 A8MV72 311 aaPredicted RBP16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 KELP23276 732 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 AGTR2P50052 363 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 CREB5Q02930 508 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 NFATC3Q12968 1075 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 EIPR1Q53HC9 387 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 ARL9Q6T311 187 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 ZDHHC14Q8IZN3 488 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 LINC00471Q8N535 108 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 CEP76Q8TAP6 659 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 CCDC115Q96NT0 180 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 FIZ1Q96SL8 496 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 DEC1Q9P2X7 70 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 ARVCFO00192 962 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 BCHEP06276 602 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 LEPRP48357 1165 aaKnown RBP16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 ARHGAP1Q07960 439 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 SLC10A2Q12908 348 aaPredicted RBP16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 ZNF234Q14588 700 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 TCEAL5Q5H9L2 206 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 POMZP3Q6PJE2 187 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 GHDCQ8N2G8 530 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 NATD1Q8N6N6 113 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 ZNF675Q8TD23 568 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 TMED9Q9BVK6 235 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 HERC2P3Q9BVR0 1158 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 BTBD19C9JJ37 291 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 DUSP11O75319 330 aaKnown RBP16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 CXCL14O95715 111 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 STOMP27105 288 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 CSKP41240 450 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 ETV4P43268 484 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 NCBP2P52298 156 aaKnown RBP eCLIP16.67■□□□□ 0.263e-9■□□□□ 10.7
PTP4A1-201ENST00000370651 GBX2P52951 348 aaPredicted RBP16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 ZNF630Q2M218 657 aaPredicted RBP16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 LRRC73Q5JTD7 316 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 CGB2Q6NT52 195 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 NPAS3Q8IXF0 933 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 FAM46DQ8NEK8 389 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 NCSTNQ92542 709 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 KCNJ9Q92806 393 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 UTP4Q969X6 686 aaKnown RBP16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 ACDQ96AP0 544 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 ZSWIM3Q96MP5 696 aa16.67■□□□□ 0.26
PTP4A1-201ENST00000370651 SLC35G6P0C7Q6 338 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 MYF6P23409 242 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 ARCN1P48444 511 aaKnown RBP16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 JAG1P78504 1218 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 ST3GAL4Q11206 333 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 CMTM7Q96FZ5 175 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 NSUN5Q96P11 429 aaKnown RBP16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 ASPNQ9BXN1 380 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 SLC6A15Q9H2J7 730 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 MT-ND2P03891 347 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 STXBP1P61764 594 aaKnown RBP16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 PTPRCAPQ14761 206 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 TOMM20Q15388 145 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 PTCHD3Q3KNS1 767 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 UNC50Q53HI1 259 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 ATG9BQ674R7 924 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 C15orf39Q6ZRI6 1047 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 NUDT13Q86X67 352 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 SAMD14Q8IZD0 417 aaPredicted RBP16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 BPIFB1Q8TDL5 484 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 SOX14O95416 240 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 CD2P06729 351 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 CBSLP0DN79 551 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 CBSP35520 551 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 GMPRP36959 345 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 GRIA2P42262 883 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 C1QTNF8P60827 252 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 RAB2AP61019 212 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 C2orf15Q8WU43 125 aaKnown RBP16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 TSGA13Q96PP4 275 aa16.66■□□□□ 0.26
PTP4A1-201ENST00000370651 RNF208Q9H0X6 261 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms