RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 OR4K3Q96R72 315 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 NDC1Q9BTX1 674 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 TMEM184CQ9NVA4 438 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 CPSF2Q9P2I0 782 aaKnown RBP14.22□□□□□ -0.13
COL9A1-204ENST00000370496 SRPK3Q9UPE1 567 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 SLC22A14Q9Y267 594 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 KCNE2Q9Y6J6 123 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 AP1M2Q9Y6Q5 423 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 TLDC2A0PJX2 215 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 SRRM3A6NNA2 597 aaPredicted RBP14.21□□□□□ -0.14
COL9A1-204ENST00000370496 TK2O00142 265 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 ZNF749O43361 778 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 CCNT2O60583 730 aaKnown RBP14.21□□□□□ -0.14
COL9A1-204ENST00000370496 EIF2S1P05198 315 aaKnown RBP14.21□□□□□ -0.14
COL9A1-204ENST00000370496 HBQ1P09105 142 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 RBP1P09455 135 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 CCNYL3P0C7X3 344 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 PYGBP11216 843 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 NPPBP16860 134 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 GDF5P43026 501 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 CCR8P51685 355 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 CDC16Q13042 620 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 FRMPD2BQ6IN97 320 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 VASH2Q86V25 355 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 DTX1Q86Y01 620 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 PLD3Q8IV08 490 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 RIBC1Q8N443 379 aaPredicted RBP14.21□□□□□ -0.14
COL9A1-204ENST00000370496 TBC1D19Q8N5T2 526 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 ACMSDQ8TDX5 336 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 MZB1Q8WU39 189 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 UBTD2Q8WUN7 234 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 NEIL2Q969S2 332 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 KIAA1143Q96AT1 154 aaPredicted RBP14.21□□□□□ -0.14
COL9A1-204ENST00000370496 GPR78Q96P69 363 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 SPRTNQ9H040 489 aaPredicted RBP14.21□□□□□ -0.14
COL9A1-204ENST00000370496 RRAGDQ9NQL2 400 aaPredicted RBP14.21□□□□□ -0.14
COL9A1-204ENST00000370496 TXLNGQ9NUQ3 528 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 DNAJC11Q9NVH1 559 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 ZNF358Q9NW07 568 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 PLAAQ9Y263 795 aa14.21□□□□□ -0.14
COL9A1-204ENST00000370496 MDC1Q14676 2089 aaKnown RBP14.2□□□□□ -0.14
COL9A1-204ENST00000370496 AHCTF1Q8WYP5 2266 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 A0A087WV48 116 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 TAPBPO15533 448 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 SMIM24O75264 130 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 STK16O75716 305 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 CTSBP07858 339 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 STAT5AP42229 794 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 KCNC1P48547 511 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 RPS15AP62244 130 aaKnown RBP14.2□□□□□ -0.14
COL9A1-204ENST00000370496 CSNK1G2P78368 415 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 GRM7Q14831 915 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 RASA2Q15283 850 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 PDK4Q16654 411 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 PFKFB4Q16877 469 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 LRRC70Q7Z2Q7 622 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 TIPARPQ7Z3E1 657 aaKnown RBP14.2□□□□□ -0.14
COL9A1-204ENST00000370496 LCA5Q86VQ0 697 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 KLHDC8AQ8IYD2 350 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 CSNK1A1LQ8N752 337 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 NKD1Q969G9 470 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 ESAMQ96AP7 390 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 MRPL46Q9H2W6 279 aaKnown RBP14.2□□□□□ -0.14
COL9A1-204ENST00000370496 GPN2Q9H9Y4 310 aaPredicted RBP14.2□□□□□ -0.14
COL9A1-204ENST00000370496 STARD5Q9NSY2 213 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 OPTCQ9UBM4 332 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 PTBP2Q9UKA9 531 aaKnown RBP14.2□□□□□ -0.14
COL9A1-204ENST00000370496 TMCO1Q9UM00 188 aa14.2□□□□□ -0.14
COL9A1-204ENST00000370496 ANKRD11Q6UB99 2663 aaPredicted RBP14.19□□□□□ -0.14
COL9A1-204ENST00000370496 LOC105369274A0A096LPK9 316 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 LOC102723532A0A0G2JNH3 316 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 FEZF1A0PJY2 475 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 H0YGG7 62 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 SRPX2O60687 465 aaPredicted RBP14.19□□□□□ -0.14
COL9A1-204ENST00000370496 KLK3P07288 261 aaPredicted RBP14.19□□□□□ -0.14
COL9A1-204ENST00000370496 GNAZP19086 355 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 ITPKBP27987 946 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 GGT5P36269 586 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 AGTR2P50052 363 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 ALDH18A1P54886 795 aaKnown RBP14.19□□□□□ -0.14
COL9A1-204ENST00000370496 UCNP55089 124 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 ARF3P61204 181 aaPredicted RBP14.19□□□□□ -0.14
COL9A1-204ENST00000370496 MEF2AQ02078 507 aaPredicted RBP14.19□□□□□ -0.14
COL9A1-204ENST00000370496 RELAQ04206 551 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 TLE3Q04726 772 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 ABHD18Q0P651 414 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 GPS2Q13227 327 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 COL9A2Q14055 689 aaPredicted RBP14.19□□□□□ -0.14
COL9A1-204ENST00000370496 SETDB1Q15047 1291 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 WASHC2DQ5SRD0 308 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 CATSPEREQ5SY80 951 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 OR4N4Q8N0Y3 316 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 ABHD11Q8NFV4 315 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 DMXL2Q8TDJ6 3036 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 MR1Q95460 341 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 MRPL57Q9BQC6 102 aaKnown RBP14.19□□□□□ -0.14
COL9A1-204ENST00000370496 NLNQ9BYT8 704 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 CD244Q9BZW8 370 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 SPRY4Q9C004 299 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 PELI2Q9HAT8 420 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms