RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 OR4N4Q8N0Y3 316 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 IL22RA1Q8N6P7 574 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 ZNF655Q8N720 491 aaPredicted RBP14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 EPS8L3Q8TE67 593 aaKnown RBP14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 ESAMQ96AP7 390 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 CPNE5Q9HCH3 593 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 MED4Q9NPJ6 270 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 ANKMY1Q9P2S6 941 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 UBXN8O00124 270 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 RFPL1O75677 317 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 KRT37O76014 449 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 KLHL2O95198 593 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 MYZAPP0CAP1 466 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 STAT5AP42229 794 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 GDF5P43026 501 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 SLC6A12P48065 614 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 ATP1A2P50993 1020 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 VSX2P58304 361 aaPredicted RBP14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 MAP7Q14244 749 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 TTMPQ5BVD1 217 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 ZC3H12BQ5HYM0 836 aaKnown RBP14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 FAM199XQ6PEV8 388 aaPredicted RBP14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 C17orf64Q86WR6 236 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 GPR135Q8IZ08 494 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 TSNARE1Q96NA8 513 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 ZNF285Q96NJ3 590 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 SH3GL2Q99962 352 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 ZFYVE21Q9BQ24 234 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 SELENOSQ9BQE4 189 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 PCBD2Q9H0N5 130 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 ACTR5Q9H9F9 607 aaPredicted RBP14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 IRAK4Q9NWZ3 460 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 CD274Q9NZQ7 290 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 PSMC3IPQ9P2W1 217 aaPredicted RBP14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 FETUBQ9UGM5 382 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 TBK1Q9UHD2 729 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 SLC22A14Q9Y267 594 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 PKD1L2Q7Z442 2459 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 FOXO6A8MYZ6 492 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 ZSCAN9O15535 394 aaPredicted RBP14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 KERAO60938 352 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 NUDT17P0C025 328 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 LIFP15018 202 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 RORAP35398 523 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 GCGRP47871 477 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 HNMTP50135 292 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 CSNK1G2P78368 415 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 NAA25Q14CX7 972 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 FAM83EQ2M2I3 478 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 MANEAQ5SRI9 462 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 LCN10Q6JVE6 187 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 CCDC91Q7Z6B0 441 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 THOC6Q86W42 341 aaKnown RBP14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 ESX1Q8N693 406 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 PDPRQ8NCN5 879 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 STAG3L4Q8TBR4 150 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 MZB1Q8WU39 189 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 NEIL2Q969S2 332 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 CLIP3Q96DZ5 547 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 CCNL2Q96S94 520 aaPredicted RBP14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 LHX9Q9NQ69 397 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 PCMTD2Q9NV79 361 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 WWOXQ9NZC7 414 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 DHCR7Q9UBM7 475 aaKnown RBP14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 SNX7Q9UNH6 387 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 ASB1Q9Y576 335 aa14.43□□□□□ -0.1
SMPDL3A-201ENST00000368440 SUPT3HB4E1H0 165 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 SUPT3HO75486 399 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 WDR47O94967 919 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 MTHFD2P13995 350 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 F8A1P23610 371 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 HSPA7P48741 367 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 MEF2AQ02078 507 aaPredicted RBP14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 ABHD18Q0P651 414 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 COL28A1Q2UY09 1125 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 CATSPEREQ5SY80 951 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 DSELQ8IZU8 1212 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 DTWD1Q8N5C7 304 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 OR2A5Q96R48 311 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 HAUS8Q9BT25 410 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 SPNS1Q9H2V7 528 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 TMEM184CQ9NVA4 438 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 NUDT4Q9NZJ9 180 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 FEZF1A0PJY2 475 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 H0YGG7 62 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 MED26O95402 600 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 STATHP02808 62 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 EIF2S1P05198 315 aaKnown RBP14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 ATXN8OSP0DMR3 200 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 EZRP15311 586 aaKnown RBP14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 AGTR2P50052 363 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 ARF3P61204 181 aaPredicted RBP14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 ACAP2Q15057 778 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 TECRLQ5HYJ1 363 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 WASHC2DQ5SRD0 308 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 C1orf189Q5VU69 101 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 BROXQ5VW32 411 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 ZNF385CQ66K41 422 aaPredicted RBP14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 TIFABQ6ZNK6 161 aa14.42□□□□□ -0.1
SMPDL3A-201ENST00000368440 KLHDC8AQ8IYD2 350 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms