RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 HCFC2Q9Y5Z7 792 aa17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 TRIM64BA6NI03 449 aa17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 SLC16A5O15375 505 aa17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 ZBTB11O95625 1053 aaPredicted RBP17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 CTSAP10619 480 aa17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 EPHA2P29317 976 aa17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 SRSF11Q05519 484 aaKnown RBP17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 SYTL3Q4VX76 610 aa17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 PTOV1Q86YD1 416 aa17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 RAVER1Q8IY67 606 aaKnown RBP17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 REM2Q8IYK8 340 aaPredicted RBP17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 PIK3C3Q8NEB9 887 aa17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 WDR20Q8TBZ3 569 aa17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 FBXL8Q96CD0 374 aa17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 TPD52L3Q96J77 140 aa17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 CNDP2Q96KP4 475 aaKnown RBP17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 CEP44Q9C0F1 390 aa17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 SGK2Q9HBY8 427 aa17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 DGKBQ9Y6T7 804 aa17.51■□□□□ 0.39
UBQLN4-201ENST00000368309 ZNF106Q9H2Y7 1883 aaKnown RBP17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 J3QRK9 145 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 SLCO2B1O94956 709 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 SLC16A8O95907 504 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 TIMP2P16035 220 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 MAGEA2P43356 314 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 TRPC1P48995 793 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 BMXP51813 675 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 WDR5P61964 334 aaKnown RBP17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 HEPHQ9BQS7 1158 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 PSME2Q9UL46 239 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 ABHD14A-ACY1A0A1B0GW23 586 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 KPNA5O15131 536 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 AXIN1O15169 862 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 IL1RNP18510 177 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 HTR1BP28222 390 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 PDHA2P29803 388 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 VIPR1P32241 457 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 LIPJQ5W064 366 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 PDE12Q6L8Q7 609 aaKnown RBP17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 BRAT1Q6PJG6 821 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 OTOP2Q7RTS6 562 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 C1orf52Q8N6N3 182 aaKnown RBP17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 RASGEF1AQ8N9B8 481 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 RAB2BQ8WUD1 216 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 MAL2Q969L2 176 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 TMEM159Q96B96 161 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 PDP1Q9P0J1 537 aaPredicted RBP17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 GABRR3A8MPY1 467 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 SLC16A6O15403 523 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 CCL5P13501 91 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 MLLT10P55197 1068 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 TUBA3CQ13748 450 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 HKDC1Q2TB90 917 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 LDLRAP1Q5SW96 308 aa17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 CLP1Q92989 425 aaKnown RBP17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 STOX2Q9P2F5 926 aaPredicted RBP17.5■□□□□ 0.39
UBQLN4-201ENST00000368309 ANGPTL1O95841 491 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 CTSLP07711 333 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 ARHGDIAP52565 204 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 CRTC3Q6UUV7 619 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 CCDC149Q6ZUS6 474 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 PARP8Q8N3A8 854 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 UBE2FQ969M7 185 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 HSH2DQ96JZ2 352 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 TPT1P8Q9HAU6 139 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 ITM2BQ9Y287 266 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 CYP2A6P11509 494 aaPredicted RBP17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 GPX2P18283 190 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 XPAP23025 273 aaPredicted RBP17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 C21orf59P57076 290 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 SPCS2Q15005 226 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 ZNF829Q3KNS6 432 aaPredicted RBP17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 DUS1LQ6P1R4 473 aaKnown RBP17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 RHNO1Q9BSD3 238 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 DUSP26Q9BV47 211 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 ERVK-18Q9QC07 812 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 ERVW-1Q9UQF0 538 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 SAMHD1Q9Y3Z3 626 aaKnown RBP17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 WNT6Q9Y6F9 365 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 CDH23Q9H251 3354 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 GBAP04062 536 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 FABP3P05413 133 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 ABCB1P08183 1280 aaPredicted RBP17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 GSTM1P09488 218 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 CLK3P49761 638 aaKnown RBP17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 GSTM4Q03013 218 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 EMX1Q04741 257 aaPredicted RBP17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 AQP6Q13520 282 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 ARHGEF6Q15052 776 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 SMN1Q16637 294 aaKnown RBP17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 LAIR1Q6GTX8 287 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 HORMAD1Q86X24 394 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 KLHL23Q8NBE8 558 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 FKBP10Q96AY3 582 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 SPHK2Q9NRA0 654 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 TDP1Q9NUW8 608 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 SPATA6Q9NWH7 488 aaPredicted RBP17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 MAFFQ9ULX9 164 aa17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 RUVBL1Q9Y265 456 aaKnown RBP17.49■□□□□ 0.39
UBQLN4-201ENST00000368309 ANXA4P09525 319 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms