RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SLC6A20Q9NP91 592 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 CCDC177Q9NQR7 707 aaPredicted RBP9.43□□□□□ -0.9
CD48-202ENST00000368046 CUTCQ9NTM9 273 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 ABCF3Q9NUQ8 709 aa9.43□□□□□ -0.9
CD48-202ENST00000368046 GEMIN8Q9NWZ8 242 aaKnown RBP9.43□□□□□ -0.9
CD48-202ENST00000368046 IFT80Q9P2H3 777 aaPredicted RBP9.43□□□□□ -0.9
CD48-202ENST00000368046 MTRF1LQ9UGC7 380 aaKnown RBP9.43□□□□□ -0.9
CD48-202ENST00000368046 FAM208BQ5VWN6 2430 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 KCNE1BA0A087WTH5 132 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 HYKKA2RU49 373 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 CDC14CA4D256 554 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 C9J4A7 227 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 H0YGG7 62 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 TXNDC9O14530 226 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 DSCR3O14972 297 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 KLF7O75840 302 aaPredicted RBP9.42□□□□□ -0.9
CD48-202ENST00000368046 GUCA1CO95843 209 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 ALBP02768 609 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 EIF2S1P05198 315 aaKnown RBP9.42□□□□□ -0.9
CD48-202ENST00000368046 EZRP15311 586 aaKnown RBP9.42□□□□□ -0.9
CD48-202ENST00000368046 STMN1P16949 149 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 STX2P32856 288 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 PHBP35232 272 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 ARF3P61204 181 aaPredicted RBP9.42□□□□□ -0.9
CD48-202ENST00000368046 RPS18P62269 152 aaKnown RBP9.42□□□□□ -0.9
CD48-202ENST00000368046 NAB1Q13506 487 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 SSPNQ14714 243 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 NCF4Q15080 339 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 UGT8Q16880 541 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 ZXDCQ2QGD7 858 aaPredicted RBP9.42□□□□□ -0.9
CD48-202ENST00000368046 ATP1A1-AS1Q5TC04 95 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 PRAMEF13Q5VWM6 474 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 LCTLQ6UWM7 567 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 OVCH1Q7RTY7 1134 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 C17orf64Q86WR6 236 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 PPM1NQ8N819 430 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 OR56A3Q8NH54 315 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 ANKRD49Q8WVL7 239 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 ALKBH8Q96BT7 664 aaKnown RBP9.42□□□□□ -0.9
CD48-202ENST00000368046 FBXL8Q96CD0 374 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 GPR22Q99680 433 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 SGPP1Q9BX95 441 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 ADNPQ9H2P0 1102 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 CAB39LQ9H9S4 337 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 STARD5Q9NSY2 213 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 CUEDC1Q9NWM3 386 aaPredicted RBP9.42□□□□□ -0.9
CD48-202ENST00000368046 CTNNAL1Q9UBT7 734 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 NDOR1Q9UHB4 597 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 GPN3Q9UHW5 284 aaPredicted RBP9.42□□□□□ -0.9
CD48-202ENST00000368046 TUBD1Q9UJT1 453 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 IKZF3Q9UKT9 509 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 POLHQ9Y253 713 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 KCNMB2Q9Y691 235 aa9.42□□□□□ -0.9
CD48-202ENST00000368046 LOC400499M0QZD8 3231 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 A0A1B0GX78 115 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 CDC7O00311 574 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 NRP2O60462 931 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 WISP3O95389 354 aaPredicted RBP9.41□□□□□ -0.9
CD48-202ENST00000368046 PRB1P04280 392 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 ANXA5P08758 320 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 FAM87AP0C7U9 286 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 CCDC166P0CW27 439 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 HNMTP50135 292 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 RAB10P61026 200 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 TBPL1P62380 186 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 CSNK1G2P78368 415 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 CDKL1Q00532 357 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 C19orf57Q0VDD7 668 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 ZNF460Q14592 562 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 PPP1R3AQ16821 1122 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 MUM1Q2TAK8 710 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 GARNL3Q5VVW2 1013 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 MRPL14Q6P1L8 145 aaKnown RBP9.41□□□□□ -0.9
CD48-202ENST00000368046 PRMT9Q6P2P2 845 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 FAM198BQ6UWH4 519 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 SBSNQ6UWP8 590 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 MBOAT1Q6ZNC8 495 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 ADCK2Q7Z695 626 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 APLFQ8IW19 511 aaPredicted RBP9.41□□□□□ -0.9
CD48-202ENST00000368046 PTERQ96BW5 349 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 PYCR2Q96C36 320 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 THAP11Q96EK4 314 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 UBXN10Q96LJ8 280 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 CYTH2Q99418 400 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 HAUS8Q9BT25 410 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 DERL2Q9GZP9 239 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 ZNF304Q9HCX3 659 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 SLC22A11Q9NSA0 550 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 CDC14AQ9UNH5 594 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 PADI2Q9Y2J8 665 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 OARD1Q9Y530 152 aa9.41□□□□□ -0.9
CD48-202ENST00000368046 PHGDHO43175 533 aaKnown RBP9.4□□□□□ -0.9
CD48-202ENST00000368046 LCMT2O60294 686 aaKnown RBP9.4□□□□□ -0.9
CD48-202ENST00000368046 FAM155BO75949 473 aa9.4□□□□□ -0.9
CD48-202ENST00000368046 CRABP2P29373 138 aa9.4□□□□□ -0.9
CD48-202ENST00000368046 GRK3P35626 688 aa9.4□□□□□ -0.9
CD48-202ENST00000368046 SLC26A3P40879 764 aa9.4□□□□□ -0.9
CD48-202ENST00000368046 POLE2P56282 527 aa9.4□□□□□ -0.9
CD48-202ENST00000368046 ATP6V0D1P61421 351 aa9.4□□□□□ -0.9
CD48-202ENST00000368046 RPS15AP62244 130 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms