RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 FAM126BQ8IXS8 530 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 STK40Q8N2I9 435 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 CBR4Q8N4T8 237 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 DPP10Q8N608 796 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 SEPT8Q92599 483 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 ALG14Q96F25 216 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 CENPNQ96H22 339 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-202ENST00000360642 ZSWIM3Q96MP5 696 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 CLSTN3Q9BQT9 956 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 FEM1AQ9BSK4 669 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 NANOGQ9H9S0 305 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 PFDN4Q9NQP4 134 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 HEBP1Q9NRV9 189 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 CD274Q9NZQ7 290 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 TRPM5Q9NZQ8 1165 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 AFF4Q9UHB7 1163 aaKnown RBP7.13□□□□□ -1.27
CLCN3-202ENST00000360642 LEF1Q9UJU2 399 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-202ENST00000360642 CDC42EP3Q9UKI2 254 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 ABT1Q9ULW3 272 aaKnown RBP7.13□□□□□ -1.27
CLCN3-202ENST00000360642 AURKCQ9UQB9 309 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 CEPT1Q9Y6K0 416 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 UNC80Q8N2C7 3258 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 TRIM64CA6NLI5 447 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 GAPDHSO14556 408 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 OR7A17O14581 309 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 ANKRD28O15084 1053 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 UMPSP11172 480 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 UGT1A6P19224 532 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 FASP25445 335 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 CALRP27797 417 aaKnown RBP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 HTR1EP28566 365 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 TUBA4AP68366 448 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 LIPEQ05469 1076 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 Q6ZVL8 140 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 SFRP1Q8N474 314 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 CDYL2Q8N8U2 506 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 ZNF461Q8TAF7 563 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 HM13Q8TCT9 377 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 PIH1D2Q8WWB5 315 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 TRIM63Q969Q1 353 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 C19orf43Q9BQ61 176 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 HAUS8Q9BT25 410 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 C1orf50Q9BV19 199 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 ACTL8Q9H568 366 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 CARS2Q9HA77 564 aaKnown RBP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 C8orf4Q9NR00 106 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 MYRFQ9Y2G1 1151 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 ZNF711Q9Y462 761 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 TET1Q8NFU7 2136 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 ZC3H12DA2A288 527 aaKnown RBP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 FAM149AA5PLN7 773 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 E5RI56 91 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 PDLIM1O00151 329 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 PRMT5O14744 637 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 LSM1O15116 133 aaKnown RBP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 BAIAP3O94812 1187 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 RASAL1O95294 804 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 ENO2P09104 434 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 MTHFD1P11586 935 aaKnown RBP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 RPS3P23396 243 aaKnown RBP eCLIP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 MYF6P23409 242 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 CA5AP35218 305 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 SLC36A3Q495N2 470 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 ATP6AP1LQ52LC2 224 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 ZNF787Q6DD87 383 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 DLEU7Q6UYE1 221 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 CERS6Q6ZMG9 384 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 TMEM150AQ86TG1 271 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 LRRC43Q8N309 656 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 CHCHD4Q8N4Q1 142 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 PDPRQ8NCN5 879 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 MAP6Q96JE9 813 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 KCTD14Q9BQ13 255 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 SMOXQ9NWM0 555 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 ZNF639Q9UID6 485 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 CCL27Q9Y4X3 112 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 PLXNA4Q9HCM2 1894 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 ANAPC1Q9H1A4 1944 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 SAC3D1A6NKF1 404 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 H3BSA7 217 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 SYNCRIPO60506 623 aaKnown RBP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 PGLSO95336 258 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 LATS1O95835 1130 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 IRF1P10914 325 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 FCGR1AP12314 374 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 CKMT1AP12532 417 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 CDH2P19022 906 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 HRH2P25021 359 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 RFC2P35250 354 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 MERTKQ12866 999 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 CDKN3Q16667 212 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 CYP51A1Q16850 503 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 C18orf21Q32NC0 220 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-202ENST00000360642 PRR23BQ6ZRT6 265 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 TAS2R42Q7RTR8 314 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 GOLGA7Q7Z5G4 137 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 ADAMTSL2Q86TH1 951 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 DCBLD1Q8N8Z6 715 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 FNDC5Q8NAU1 212 aa7.12□□□□□ -1.27
CLCN3-202ENST00000360642 ADAMTS16Q8TE57 1224 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms