RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ACVR2AP27037 513 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 WASP42768 502 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 LEPRP48357 1165 aaKnown RBP11.43□□□□□ -0.58
COL9A1-202ENST00000357250 ST3GAL3Q11203 375 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 ZNF678Q5SXM1 525 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 CEP68Q76N32 757 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 OR8J3Q8NGG0 315 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 EZH1Q92800 747 aaPredicted RBP11.43□□□□□ -0.58
COL9A1-202ENST00000357250 LGR4Q9BXB1 951 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 FAM53CQ9NYF3 392 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 ABI3Q9P2A4 366 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 SLC17A6Q9P2U8 582 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 AASSQ9UDR5 926 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 PPM1HQ9ULR3 514 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 CCDC88AQ3V6T2 1871 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 CNTRLQ7Z7A1 2325 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 TRBC2A0A5B9 178 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 EME2A4GXA9 379 aaPredicted RBP11.43□□□□□ -0.58
COL9A1-202ENST00000357250 H0YAE9 185 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 CREG1O75629 220 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 YAP1P46937 504 aaKnown RBP11.43□□□□□ -0.58
COL9A1-202ENST00000357250 DNM1P34Q6PK57 102 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 ZCCHC10Q8TBK6 192 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 ART5Q96L15 291 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 EPYCQ99645 322 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 SLC2A11Q9BYW1 496 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 CD244Q9BZW8 370 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 UCK2Q9BZX2 261 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 TTYH1Q9H313 450 aaPredicted RBP11.43□□□□□ -0.58
COL9A1-202ENST00000357250 CCSER2Q9H7U1 834 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 OSER1Q9NX31 292 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 MKLN1Q9UL63 735 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 UBR2Q8IWV8 1755 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 FAM172BPA6NC97 362 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 KLHL33A6NCF5 533 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 DCLK1O15075 740 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 HLA-DPB1P04440 258 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 ZNF3P17036 446 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 CD72P21854 359 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 SCAPQ12770 1279 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 SLC13A2Q13183 592 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 IFNLR1Q8IU57 520 aaPredicted RBP11.43□□□□□ -0.58
COL9A1-202ENST00000357250 NPAS3Q8IXF0 933 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 MND1Q9BWT6 205 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 SPATA9Q9BWV2 254 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 HAPLN2Q9GZV7 340 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 XYLT2Q9H1B5 865 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 TBC1D17Q9HA65 648 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 SRRDQ9UH36 339 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 PCDHGB6Q9Y5F9 930 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 FAM25EA8MYX2 175 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 ENTPD6O75354 484 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 RFPL1O75677 317 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 CYB5AP00167 134 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 ADH5P11766 374 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 POU2F1P14859 743 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 ACVRL1P37023 503 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 CAMK1Q14012 370 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 NADK2Q4G0N4 442 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 RBM20Q5T481 1227 aaKnown RBP11.43□□□□□ -0.58
COL9A1-202ENST00000357250 OR4F3Q6IEY1 312 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 DCUN1D3Q8IWE4 304 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 TMEM145Q8NBT3 493 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 FATE1Q969F0 183 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 C16orf70Q9BSU1 422 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 TPT1P8Q9HAU6 139 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 HCN3Q9P1Z3 774 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 TMEM5Q9Y2B1 443 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 PCDHGA10Q9Y5H3 936 aa11.43□□□□□ -0.58
COL9A1-202ENST00000357250 LOC100130705A0A1B0GUX0 176 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 OR14I1A6ND48 311 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 CDC7O00311 574 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 SOX30O94993 753 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 ALAS2P22557 587 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 RYKP34925 604 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 TGFBIQ15582 683 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 ARSIQ5FYB1 569 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 UBAP2Q5T6F2 1119 aaKnown RBP11.42□□□□□ -0.58
COL9A1-202ENST00000357250 ATG9BQ674R7 924 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 C22orf39Q6P5X5 142 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 BTN2A1Q7KYR7 527 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 NANOGNBQ7Z5D8 188 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 TMCO2Q7Z6W1 182 aaPredicted RBP11.42□□□□□ -0.58
COL9A1-202ENST00000357250 GALNT7Q86SF2 657 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 CAND1Q86VP6 1230 aaKnown RBP11.42□□□□□ -0.58
COL9A1-202ENST00000357250 CCDC107Q8WV48 283 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 TAMM41Q96BW9 452 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 RGS17Q9UGC6 210 aaPredicted RBP11.42□□□□□ -0.58
COL9A1-202ENST00000357250 SLC22A14Q9Y267 594 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 SPIN1Q9Y657 262 aaPredicted RBP11.42□□□□□ -0.58
COL9A1-202ENST00000357250 COL2A1P02458 1487 aaPredicted RBP11.42□□□□□ -0.58
COL9A1-202ENST00000357250 A0A1W2PRU2 124 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 ELOA3DA6NLF2 546 aaPredicted RBP11.42□□□□□ -0.58
COL9A1-202ENST00000357250 MEIS3P2A8K0S8 358 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 LOC730098B7Z3J9 87 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 KMOO15229 486 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 LATS1O95835 1130 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 ACTR1BP42025 376 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 CCNHP51946 323 aaPredicted RBP11.42□□□□□ -0.58
COL9A1-202ENST00000357250 TAS2R43P59537 309 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms