RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 OR1L3Q8NH93 324 aa17.14■□□□□ 0.33
PDLIM7-202ENST00000355841 MDM1Q8TC05 714 aa17.14■□□□□ 0.33
PDLIM7-202ENST00000355841 TCP10LQ8TDR4 215 aa17.14■□□□□ 0.33
PDLIM7-202ENST00000355841 N4BP2L2Q92802 583 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-202ENST00000355841 NSUN5Q96P11 429 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-202ENST00000355841 FAM111AQ96PZ2 611 aa17.14■□□□□ 0.33
PDLIM7-202ENST00000355841 TAAR9Q96RI9 348 aa17.14■□□□□ 0.33
PDLIM7-202ENST00000355841 IQCGQ9H095 443 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-202ENST00000355841 TMBIM4Q9HC24 238 aa17.14■□□□□ 0.33
PDLIM7-202ENST00000355841 FBXO8Q9NRD0 319 aa17.14■□□□□ 0.33
PDLIM7-202ENST00000355841 STARD5Q9NSY2 213 aa17.14■□□□□ 0.33
PDLIM7-202ENST00000355841 MKS1Q9NXB0 559 aa17.14■□□□□ 0.33
PDLIM7-202ENST00000355841 PILRAQ9UKJ1 303 aa17.14■□□□□ 0.33
PDLIM7-202ENST00000355841 PLLPQ9Y342 182 aa17.14■□□□□ 0.33
PDLIM7-202ENST00000355841 G3V2L1 256 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 K7EPI3 171 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 TAC1P20366 129 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 CCDC153Q494R4 210 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 DCAF12Q5T6F0 453 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 LRRC70Q7Z2Q7 622 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 ABHD11Q8NFV4 315 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 ARL8AQ96BM9 186 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 NXPE2Q96DL1 559 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 SPRTNQ9H040 489 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 ASCL3Q9NQ33 180 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 TMEM184CQ9NVA4 438 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 ZNF446Q9NWS9 450 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 SENP1Q9P0U3 644 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 RARRES3Q9UL19 164 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 E2F3O00716 465 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 TYROBPO43914 113 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 MYL2P10916 166 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 GNAZP19086 355 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 ATP5F1P24539 256 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 SLC5A2P31639 672 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 CCR8P51685 355 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 PCBP2Q15366 365 aaKnown RBP eCLIP17.13■□□□□ 0.332e-6■■■■□ 24.4
PDLIM7-202ENST00000355841 PWWP2BQ6NUJ5 590 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 NXPE4Q6UWF7 544 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 SLCO4C1Q6ZQN7 724 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 PPP1R3BQ86XI6 285 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 TMEM237Q96Q45 408 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 ZFYVE21Q9BQ24 234 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 CHRNA10Q9GZZ6 450 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 IRAK4Q9NWZ3 460 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 PLCL2Q9UPR0 1127 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 ANGPTL3Q9Y5C1 460 aa17.13■□□□□ 0.33
PDLIM7-202ENST00000355841 STX16-NPEPL1H3BU86 382 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 STX16O14662 325 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 LCMT2O60294 686 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 EIF2S1P05198 315 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 ZNF28P17035 718 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 TSPAN8P19075 237 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 VSX2P58304 361 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 GTF2H2Q13888 395 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 IL11RAQ14626 422 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 GTF2H2CQ6P1K8 395 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 ZYG11AQ6WRX3 759 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 RNF44Q7L0R7 432 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 GOLGA7Q7Z5G4 137 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 GATA6Q92908 595 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 MACROD1Q9BQ69 325 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 SELENOSQ9BQE4 189 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 FANCEQ9HB96 536 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 ANKMY1Q9P2S6 941 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 TMCO1Q9UM00 188 aa17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 TNPO3Q9Y5L0 923 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-202ENST00000355841 HEATR5BQ9P2D3 2071 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 SPTBP11277 2137 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 CDRT15L2A8MXV6 281 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 H0YGG7 62 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 OR2B3O76000 313 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 FGF5P12034 268 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 CPA3P15088 417 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 EZRP15311 586 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 EPB42P16452 691 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 HRH2P25021 359 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 BCL6P41182 706 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 CDH13P55290 713 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 RAB15P59190 212 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 ARF3P61204 181 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 MAGOHP61326 146 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 NFKB2Q00653 900 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 NAA25Q14CX7 972 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 XKR6Q5GH73 641 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 ZC3H12BQ5HYM0 836 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 TMEM164Q5U3C3 297 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 CEACAM20Q6UY09 585 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 OR4K1Q8NGD4 311 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 OR2A5Q96R48 311 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 DDA1Q9BW61 102 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 VIPAS39Q9H9C1 493 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 ZBTB26Q9HCK0 441 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 KCNK9Q9NPC2 374 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 SERTAD3Q9UJW9 196 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 PCTPQ9UKL6 214 aa17.11■□□□□ 0.33
PDLIM7-202ENST00000355841 C1QTNF9BB2RNN3 333 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 H3BMH7 237 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 PPP6CO00743 305 aa17.1■□□□□ 0.33
PDLIM7-202ENST00000355841 CLGNO14967 610 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms