RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 A0A1B0GTW7 788 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 MAP2K7O14733 419 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 TPST2O60704 377 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 ABLIM3O94929 683 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 ZNF37AP17032 561 aaPredicted RBP9.42□□□□□ -0.9
GABPA-201ENST00000354828 DEFB110Q30KQ9 67 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 FAM180AQ6UWF9 173 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 OR5AK3PQ8NH89 298 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 ZNF671Q8TAW3 534 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 PHOSPHO1Q8TCT1 267 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 EZH1Q92800 747 aaPredicted RBP9.42□□□□□ -0.9
GABPA-201ENST00000354828 ZNF689Q96CS4 500 aaPredicted RBP9.42□□□□□ -0.9
GABPA-201ENST00000354828 CHFRQ96EP1 664 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 SLC29A3Q9BZD2 475 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 GAREM1Q9H706 876 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 LYARQ9NX58 379 aaKnown RBP9.42□□□□□ -0.9
GABPA-201ENST00000354828 PCDH10Q9P2E7 1040 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 SHANK3Q9BYB0 1731 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 DHRS12A0PJE2 317 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 SASH3O75995 380 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 PGM3O95394 542 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 MYCLP1P12525 358 aaPredicted RBP9.42□□□□□ -0.9
GABPA-201ENST00000354828 FNTBP49356 437 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 PDX1P52945 283 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 GPR141Q7Z602 305 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 ZDHHC14Q8IZN3 488 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 NATD1Q8N6N6 113 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 RNASE11Q8TAA1 199 aaKnown RBP9.42□□□□□ -0.9
GABPA-201ENST00000354828 ELSPBP1Q96BH3 223 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 CTPS2Q9NRF8 586 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 MOCS1Q9NZB8 636 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 C3orf18Q9UK00 162 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 RNF11Q9Y3C5 154 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 PRORSD1PA6NEY8 169 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 NPIPB15A6NHN6 443 aaPredicted RBP9.42□□□□□ -0.9
GABPA-201ENST00000354828 A6NL46 340 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 EDIL3O43854 480 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 AGR2O95994 175 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 RNH1P13489 461 aaKnown RBP9.42□□□□□ -0.9
GABPA-201ENST00000354828 YAP1P46937 504 aaKnown RBP9.42□□□□□ -0.9
GABPA-201ENST00000354828 AFF3P51826 1226 aaKnown RBP9.42□□□□□ -0.9
GABPA-201ENST00000354828 FIGLAQ6QHK4 219 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 DEPDC4Q8N2C3 294 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 C2CD4AQ8NCU7 369 aaPredicted RBP9.42□□□□□ -0.9
GABPA-201ENST00000354828 FAM81AQ8TBF8 368 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 DAZLQ92904 295 aaKnown RBP9.42□□□□□ -0.9
GABPA-201ENST00000354828 KIAA1191Q96A73 305 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 PLEKHG4BQ96PX9 1271 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 CD244Q9BZW8 370 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 MS4A12Q9NXJ0 267 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 OBP2AQ9NY56 170 aa9.42□□□□□ -0.9
GABPA-201ENST00000354828 E7EQ34 232 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 AGPSO00116 658 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 MANBAO00462 879 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 LINC01565O15544 149 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 STX11O75558 287 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 MFN2O95140 757 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 HOXD9P28356 352 aaPredicted RBP9.41□□□□□ -0.9
GABPA-201ENST00000354828 ZNF41P51814 821 aaPredicted RBP9.41□□□□□ -0.9
GABPA-201ENST00000354828 GSTM4Q03013 218 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 INAQ16352 499 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 DCST1Q5T197 706 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 TMEM154Q6P9G4 183 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 OR4K14Q8NGD5 310 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 OR52J3Q8NH60 311 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 ISG20Q96AZ6 181 aaKnown RBP9.41□□□□□ -0.9
GABPA-201ENST00000354828 YIPF3Q9GZM5 350 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 ACTL8Q9H568 366 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 B4GALT7Q9UBV7 327 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 FAM159BA6NKW6 160 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 PSMD11O00231 422 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 KPNA4O00629 521 aaPredicted RBP9.41□□□□□ -0.9
GABPA-201ENST00000354828 CHRNGP07510 517 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 MPC1LP0DKB6 136 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 TMED10P49755 219 aaKnown RBP9.41□□□□□ -0.9
GABPA-201ENST00000354828 TOP3AQ13472 1001 aaPredicted RBP9.41□□□□□ -0.9
GABPA-201ENST00000354828 MBTPS1Q14703 1052 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 IRF4Q15306 451 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 NRF1Q16656 503 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 TCTE1Q5JU00 501 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 SLC30A6Q6NXT4 461 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 Q7L0L9 218 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 RAB43Q86YS6 212 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 OR10Q1Q8NGQ4 319 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 PIGXQ8TBF5 258 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 GPR22Q99680 433 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 CXCL16Q9H2A7 254 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 LRIT1Q9P2V4 623 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 ADAM30Q9UKF2 790 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 MAU2Q9Y6X3 613 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 MYH4Q9Y623 1939 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 CDC40O60508 579 aaKnown RBP eCLIP9.41□□□□□ -0.9
GABPA-201ENST00000354828 IL33O95760 270 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 AK4P27144 223 aaPredicted RBP9.41□□□□□ -0.9
GABPA-201ENST00000354828 PCDH1Q08174 1060 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 CYP27C1Q4G0S4 372 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 HSF5Q4G112 596 aaPredicted RBP9.41□□□□□ -0.9
GABPA-201ENST00000354828 ADGRD2Q7Z7M1 963 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 OAFQ86UD1 273 aa9.41□□□□□ -0.9
GABPA-201ENST00000354828 C8orf59Q8N0T1 100 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms