RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 SMARCAL1Q9NZC9 954 aa15.03■□□□□ -0
DDX55-202ENST00000354291 ST6GALNAC2Q9UJ37 374 aa15.03■□□□□ -0
DDX55-202ENST00000354291 PACSIN2Q9UNF0 486 aaPredicted RBP15.03■□□□□ -0
DDX55-202ENST00000354291 RTTNQ86VV8 2226 aa15.02■□□□□ -0
DDX55-202ENST00000354291 IGLV3-12A0A075B6K2 115 aa15.02■□□□□ -0
DDX55-202ENST00000354291 LOC105369274A0A096LPK9 316 aa15.02■□□□□ -0
DDX55-202ENST00000354291 LOC102723532A0A0G2JNH3 316 aa15.02■□□□□ -0
DDX55-202ENST00000354291 A0A0J9YVX5 310 aa15.02■□□□□ -0
DDX55-202ENST00000354291 A0A1W2PQ72 361 aa15.02■□□□□ -0
DDX55-202ENST00000354291 BHMG1C9JSJ3 638 aaPredicted RBP15.02■□□□□ -0
DDX55-202ENST00000354291 H7C0S8 307 aa15.02■□□□□ -0
DDX55-202ENST00000354291 TOXO94900 526 aa15.02■□□□□ -0
DDX55-202ENST00000354291 FTCDO95954 541 aa15.02■□□□□ -0
DDX55-202ENST00000354291 HOXD4P09016 255 aaPredicted RBP15.02■□□□□ -0
DDX55-202ENST00000354291 GSTM1P09488 218 aa15.02■□□□□ -0
DDX55-202ENST00000354291 CD46P15529 392 aa15.02■□□□□ -0
DDX55-202ENST00000354291 CD9P21926 228 aa15.02■□□□□ -0
DDX55-202ENST00000354291 CDC25BP30305 580 aa15.02■□□□□ -0
DDX55-202ENST00000354291 STIP1P31948 543 aaKnown RBP15.02■□□□□ -0
DDX55-202ENST00000354291 CSE1LP55060 971 aaKnown RBP15.02■□□□□ -0
DDX55-202ENST00000354291 GSTM4Q03013 218 aa15.02■□□□□ -0
DDX55-202ENST00000354291 OR1C1Q15619 314 aa15.02■□□□□ -0
DDX55-202ENST00000354291 MUM1Q2TAK8 710 aa15.02■□□□□ -0
DDX55-202ENST00000354291 SYTL3Q4VX76 610 aa15.02■□□□□ -0
DDX55-202ENST00000354291 GALNTL5Q7Z4T8 443 aa15.02■□□□□ -0
DDX55-202ENST00000354291 BIVMQ86UB2 503 aa15.02■□□□□ -0
DDX55-202ENST00000354291 CHERPQ8IWX8 916 aaKnown RBP15.02■□□□□ -0
DDX55-202ENST00000354291 OR4N4Q8N0Y3 316 aa15.02■□□□□ -0
DDX55-202ENST00000354291 RNF10Q8N5U6 811 aaKnown RBP15.02■□□□□ -0
DDX55-202ENST00000354291 SLC35B2Q8TB61 432 aa15.02■□□□□ -0
DDX55-202ENST00000354291 ZUFSPQ96AP4 578 aa15.02■□□□□ -0
DDX55-202ENST00000354291 HES6Q96HZ4 224 aa15.02■□□□□ -0
DDX55-202ENST00000354291 IMMP1LQ96LU5 166 aa15.02■□□□□ -0
DDX55-202ENST00000354291 ZNF354BQ96LW1 612 aa15.02■□□□□ -0
DDX55-202ENST00000354291 FRMD6Q96NE9 622 aa15.02■□□□□ -0
DDX55-202ENST00000354291 ALS2CR12Q96Q35 445 aa15.02■□□□□ -0
DDX55-202ENST00000354291 UTP23Q9BRU9 249 aaKnown RBP15.02■□□□□ -0
DDX55-202ENST00000354291 NLE1Q9NVX2 485 aaPredicted RBP15.02■□□□□ -0
DDX55-202ENST00000354291 ASB1Q9Y576 335 aa15.02■□□□□ -0
DDX55-202ENST00000354291 PRSS21Q9Y6M0 314 aa15.02■□□□□ -0
DDX55-202ENST00000354291 NSD1Q96L73 2696 aaPredicted RBP15.01□□□□□ -0.01
DDX55-202ENST00000354291 TRBV5-4A0A0C4DH59 114 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 ASPDHA6ND91 283 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 METTL18O95568 372 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 S1PR4O95977 384 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 ERVK-10P10266 1014 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 TPH1P17752 444 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 DNASE1P24855 282 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 MSX1P28360 303 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 ADAM8P78325 824 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 TFF3Q07654 80 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 FASTKQ14296 549 aaKnown RBP15.01□□□□□ -0.01
DDX55-202ENST00000354291 TMEM198Q66K66 360 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 FGD2Q7Z6J4 655 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 LINC00523Q86TU6 105 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 TMEM178AQ8NBL3 297 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 FAM98AQ8NCA5 519 aaKnown RBP15.01□□□□□ -0.01
DDX55-202ENST00000354291 MDS2Q8NDY4 140 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 CFAP61Q8NHU2 1237 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 STYXQ8WUJ0 223 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 DNAJC1Q96KC8 554 aaKnown RBP15.01□□□□□ -0.01
DDX55-202ENST00000354291 CABS1Q96KC9 395 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 DESI2Q9BSY9 194 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 TUBB6Q9BUF5 446 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 POLDIP3Q9BY77 421 aaKnown RBP15.01□□□□□ -0.01
DDX55-202ENST00000354291 ENAMQ9NRM1 1142 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 MKL2Q9ULH7 1088 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 CDC14AQ9UNH5 594 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 RNF6Q9Y252 685 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 PLEKHA6Q9Y2H5 1048 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 FAM169AQ9Y6X4 670 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 COL6A5A8TX70 2615 aa15.01□□□□□ -0.01
DDX55-202ENST00000354291 LOC102723996A0A087X1L8 192 aa15□□□□□ -0.01
DDX55-202ENST00000354291 IGHV3-20A0A0C4DH32 117 aa15□□□□□ -0.01
DDX55-202ENST00000354291 KIAA1324LA8MWY0 1029 aaPredicted RBP15□□□□□ -0.01
DDX55-202ENST00000354291 GOLGA6L6A8MZA4 724 aa15□□□□□ -0.01
DDX55-202ENST00000354291 TARM1B6A8C7 271 aa15□□□□□ -0.01
DDX55-202ENST00000354291 SEC24DO94855 1032 aaPredicted RBP15□□□□□ -0.01
DDX55-202ENST00000354291 AP2A2O94973 939 aa15□□□□□ -0.01
DDX55-202ENST00000354291 TPOP07202 933 aa15□□□□□ -0.01
DDX55-202ENST00000354291 CHRNB4P30926 498 aa15□□□□□ -0.01
DDX55-202ENST00000354291 DGKQP52824 942 aa15□□□□□ -0.01
DDX55-202ENST00000354291 OC90Q02509 493 aaPredicted RBP15□□□□□ -0.01
DDX55-202ENST00000354291 BTBD16Q32M84 506 aa15□□□□□ -0.01
DDX55-202ENST00000354291 TMEM211Q6ICI0 200 aa15□□□□□ -0.01
DDX55-202ENST00000354291 CCDC71Q8IV32 467 aaPredicted RBP15□□□□□ -0.01
DDX55-202ENST00000354291 MARVELD2Q8N4S9 558 aa15□□□□□ -0.01
DDX55-202ENST00000354291 SPC24Q8NBT2 197 aa15□□□□□ -0.01
DDX55-202ENST00000354291 SCMH1Q96GD3 660 aa15□□□□□ -0.01
DDX55-202ENST00000354291 CDKN2AIPNLQ96HQ2 116 aa15□□□□□ -0.01
DDX55-202ENST00000354291 FRMD8P1Q9BZ68 369 aaPredicted RBP15□□□□□ -0.01
DDX55-202ENST00000354291 TSGA10Q9BZW7 698 aa15□□□□□ -0.01
DDX55-202ENST00000354291 KCNK13Q9HB14 408 aa15□□□□□ -0.01
DDX55-202ENST00000354291 C14orf105Q9NVL8 296 aa15□□□□□ -0.01
DDX55-202ENST00000354291 SLC39A10Q9ULF5 831 aa15□□□□□ -0.01
DDX55-202ENST00000354291 R3HDM2Q9Y2K5 976 aaKnown RBP15□□□□□ -0.01
DDX55-202ENST00000354291 CPAMD8Q8IZJ3 1885 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 A0A0U1RQJ8 604 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 SLC5A10A0PJK1 596 aa14.99□□□□□ -0.01
DDX55-202ENST00000354291 ERI2A8K979 691 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms