RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 PHF21BQ96EK2 531 aa13.29□□□□□ -0.28
TPM4-202ENST00000344824 EGFL8Q99944 293 aa13.29□□□□□ -0.28
TPM4-202ENST00000344824 GPN2Q9H9Y4 310 aaPredicted RBP13.29□□□□□ -0.28
TPM4-202ENST00000344824 SPHK1Q9NYA1 384 aa13.29□□□□□ -0.28
TPM4-202ENST00000344824 PCDHGA4Q9Y5G9 962 aa13.29□□□□□ -0.28
TPM4-202ENST00000344824 PIEZO2Q9H5I5 2752 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 LOC101059948A0A1B0GTJ6 334 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 SYCE1LA8MT33 242 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 A8MT66 165 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 ARHGEF33A8MVX0 844 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 TARM1B6A8C7 271 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 DLX3O60479 287 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 SCRG1O75711 98 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 TIAF1O95411 115 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 DLGAP3O95886 979 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 CATP04040 527 aaKnown RBP13.28□□□□□ -0.28
TPM4-202ENST00000344824 NTRK1P04629 796 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 TPBGLP0DKB5 382 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 FGF5P12034 268 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 WT1P19544 449 aaPredicted RBP13.28□□□□□ -0.28
TPM4-202ENST00000344824 CYP2A7P20853 494 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 ATP5F1P24539 256 aaPredicted RBP13.28□□□□□ -0.28
TPM4-202ENST00000344824 MAP4P27816 1152 aaKnown RBP13.28□□□□□ -0.28
TPM4-202ENST00000344824 MDH1P40925 334 aaKnown RBP13.28□□□□□ -0.28
TPM4-202ENST00000344824 RAB28P51157 221 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 CYP4F2P78329 520 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 TSTA3Q13630 321 aaPredicted RBP13.28□□□□□ -0.28
TPM4-202ENST00000344824 PFKFB4Q16877 469 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 C6orf15Q6UXA7 325 aaPredicted RBP13.28□□□□□ -0.28
TPM4-202ENST00000344824 D2HGDHQ8N465 521 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 RAB42Q8N4Z0 105 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 ESX1Q8N693 406 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 PTGR2Q8N8N7 351 aaPredicted RBP13.28□□□□□ -0.28
TPM4-202ENST00000344824 C19orf47Q8N9M1 422 aaKnown RBP13.28□□□□□ -0.28
TPM4-202ENST00000344824 RDH11Q8TC12 318 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 TRAPPC9Q96Q05 1148 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 UBL7Q96S82 380 aaPredicted RBP13.28□□□□□ -0.28
TPM4-202ENST00000344824 TRIM54Q9BYV2 358 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 SLC7A5P2Q9GIP4 190 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 IRAK4Q9NWZ3 460 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 PDE10AQ9Y233 779 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 BTRCQ9Y297 605 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 TMEM184BQ9Y519 407 aaPredicted RBP13.28□□□□□ -0.28
TPM4-202ENST00000344824 OARD1Q9Y530 152 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 FER1L5A0AVI2 2057 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 HEATR5BQ9P2D3 2071 aa13.28□□□□□ -0.28
TPM4-202ENST00000344824 ATMQ13315 3056 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 A0A0J9YY10 115 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 PSIP1O75475 530 aaKnown RBP13.27□□□□□ -0.29
TPM4-202ENST00000344824 MATN4O95460 622 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 PEBP1P30086 187 aaKnown RBP13.27□□□□□ -0.29
TPM4-202ENST00000344824 SP140Q13342 867 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 COL9A2Q14055 689 aaPredicted RBP13.27□□□□□ -0.29
TPM4-202ENST00000344824 TGFBIQ15582 683 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 CHI3L2Q15782 390 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 PPP1R3AQ16821 1122 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 C18orf21Q32NC0 220 aaPredicted RBP13.27□□□□□ -0.29
TPM4-202ENST00000344824 CCSMST1Q4G0I0 132 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.27□□□□□ -0.29
TPM4-202ENST00000344824 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.27□□□□□ -0.29
TPM4-202ENST00000344824 PWWP2BQ6NUJ5 590 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 FAM20CQ8IXL6 584 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 CARFQ8N187 725 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 MOCOSQ96EN8 888 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 SLC12A9Q9BXP2 914 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 PARVBQ9HBI1 364 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 ARL15Q9NXU5 204 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 NUDT4Q9NZJ9 180 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 OR6C2Q9NZP2 312 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 SEMA5BQ9P283 1151 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 CCDC88CQ9P219 2028 aa13.27□□□□□ -0.29
TPM4-202ENST00000344824 LRRC14BA6NHZ5 514 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 GFYI3L273 518 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 SLC16A5O15375 505 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 BIRC5O15392 142 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 KATNA1O75449 491 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 C1orf105O95561 183 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 HIST1H2AGP0C0S8 130 aaPredicted RBP13.26□□□□□ -0.29
TPM4-202ENST00000344824 PRKAR1AP10644 381 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 MTHFD2P13995 350 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 HIST1H2ADP20671 130 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 DLSTP36957 453 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 STAT5AP42229 794 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 AGTR2P50052 363 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 GNGT1P63211 74 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 RHDQ02161 417 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 ABHD18Q0P651 414 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 PRAMEF17Q5VTA0 474 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 LIPMQ5VYY2 423 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 CCNYL1Q8N7R7 359 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 LINC01555Q8NAE3 123 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 MCOLN3Q8TDD5 553 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 LRRC8CQ8TDW0 803 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 CKAP2Q8WWK9 683 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 SREK1Q8WXA9 508 aaKnown RBP13.26□□□□□ -0.29
TPM4-202ENST00000344824 ESAMQ96AP7 390 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 RAD51AP1Q96B01 352 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 ZNF501Q96CX3 271 aaPredicted RBP13.26□□□□□ -0.29
TPM4-202ENST00000344824 HIST1H2AHQ96KK5 128 aa13.26□□□□□ -0.29
TPM4-202ENST00000344824 BBC3Q96PG8 261 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms