RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 GPR174Q9BXC1 333 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 OR51B5Q9H339 312 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 PIF1Q9H611 641 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 RMI1Q9H9A7 625 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 KLF15Q9UIH9 416 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 INVSQ9Y283 1065 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 BTBD3Q9Y2F9 522 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 DYRK1BQ9Y463 629 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 PCDHGA11Q9Y5H2 935 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 HEATR5BQ9P2D3 2071 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 IGKV1-8A0A0C4DH67 115 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 FEZF1A0PJY2 475 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 AKAP10O43572 662 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 PI15O43692 258 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 BCAS2O75934 225 aaPredicted RBP13.08□□□□□ -0.32
CDC42-202ENST00000344548 KLHL18O94889 574 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 IDSP22304 550 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 DGKEP52429 567 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 CLDN8P56748 225 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 SLC34A1Q06495 639 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 CSTF3Q12996 717 aaKnown RBP13.08□□□□□ -0.32
CDC42-202ENST00000344548 MAD2L1Q13257 205 aaPredicted RBP13.08□□□□□ -0.32
CDC42-202ENST00000344548 RPE65Q16518 533 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 ALG11Q2TAA5 492 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 UAP1L1Q3KQV9 507 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 COQ5Q5HYK3 327 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 ANKRD26P1Q6NSI1 321 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 SLC30A9Q6PML9 568 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 DNAJC14Q6Y2X3 702 aaPredicted RBP13.08□□□□□ -0.32
CDC42-202ENST00000344548 ARMCX6Q7L4S7 300 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 ANKRD46Q86W74 232 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 MSRB3Q8IXL7 192 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 RIMKLAQ8IXN7 391 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 OR52E1Q8NGJ3 308 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 GTF2H4Q92759 462 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 FCRL1Q96LA6 429 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 IKZF5Q9H5V7 419 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 POLMQ9NP87 494 aaPredicted RBP13.08□□□□□ -0.32
CDC42-202ENST00000344548 WSB2Q9NYS7 404 aaPredicted RBP13.08□□□□□ -0.32
CDC42-202ENST00000344548 VAPAQ9P0L0 249 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 EGFL7Q9UHF1 273 aa13.08□□□□□ -0.32
CDC42-202ENST00000344548 H7BY64 318 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 MAN2B1O00754 1011 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 YY2O15391 372 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 DFNA5O60443 496 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 BAG2O95816 211 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 IGLV3-19P01714 112 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 LMNAP02545 664 aaKnown RBP13.07□□□□□ -0.32
CDC42-202ENST00000344548 PGRP06401 933 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 MTPNP58546 118 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 IRX1P78414 480 aaPredicted RBP13.07□□□□□ -0.32
CDC42-202ENST00000344548 LCTLQ6UWM7 567 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 NRROSQ86YC3 692 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 PLD3Q8IV08 490 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 LAS2Q8IYD9 372 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 ANKRD53Q8N9V6 530 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 DENND6BQ8NEG7 585 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 SLC13A3Q8WWT9 602 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 ASB9Q96DX5 294 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 MSANTD3Q96H12 275 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 WDR92Q96MX6 357 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 PRAP1Q96NZ9 151 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 HOPXQ9BPY8 73 aaPredicted RBP13.07□□□□□ -0.32
CDC42-202ENST00000344548 ORAI3Q9BRQ5 295 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 SLC25A37Q9NYZ2 338 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 ZNF624Q9P2J8 865 aaPredicted RBP13.07□□□□□ -0.32
CDC42-202ENST00000344548 ICKQ9UPZ9 632 aa13.07□□□□□ -0.32
CDC42-202ENST00000344548 SDK1Q7Z5N4 2213 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 FAM170BA6NMN3 283 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 CHURC1-FNTBB4DL54 471 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 RASGRP1O95267 797 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 CELA2BP08218 269 aaPredicted RBP13.06□□□□□ -0.32
CDC42-202ENST00000344548 HOXC4P09017 264 aaPredicted RBP13.06□□□□□ -0.32
CDC42-202ENST00000344548 HOXB3P14651 431 aaPredicted RBP13.06□□□□□ -0.32
CDC42-202ENST00000344548 DHDDSQ86SQ9 333 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 IFNEQ86WN2 208 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 C10orf111Q8N326 155 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 DPP10Q8N608 796 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 OR2A1Q8NGT9 310 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 SETD7Q8WTS6 366 aaKnown RBP13.06□□□□□ -0.32
CDC42-202ENST00000344548 CHTF18Q8WVB6 975 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 PATE1Q8WXA2 126 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 INPP5KQ9BT40 448 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 SORBS1Q9BX66 1292 aaKnown RBP13.06□□□□□ -0.32
CDC42-202ENST00000344548 SYNPO2LQ9H987 977 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 LTB4R2Q9NPC1 389 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 SERHLQ9NQF3 203 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 SPHK1Q9NYA1 384 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 SUCOQ9UBS9 1254 aaKnown RBP13.06□□□□□ -0.32
CDC42-202ENST00000344548 EFNA1P20827 205 aaPredicted RBP13.06□□□□□ -0.32
CDC42-202ENST00000344548 ATP6V1B2P21281 511 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 PEBP1P30086 187 aaKnown RBP13.06□□□□□ -0.32
CDC42-202ENST00000344548 CDKN2CP42773 168 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 UGT8Q16880 541 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 SAMD4BQ5PRF9 694 aaKnown RBP13.06□□□□□ -0.32
CDC42-202ENST00000344548 GPR153Q6NV75 609 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 KBTBD2Q8IY47 623 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 DEFB123Q8N688 67 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 OR7A2PQ8NGA2 310 aa13.06□□□□□ -0.32
CDC42-202ENST00000344548 WDR48Q8TAF3 677 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms