RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 NPPBP16860 134 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 HRH2P25021 359 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 CTHP32929 405 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 S100A3P33764 101 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 PNLIPRP1P54315 467 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 OR4D2P58180 307 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 TAP2Q03519 686 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 SGCGQ13326 291 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 NHSL2Q5HYW2 709 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 CATSPEREQ5SY80 951 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 UNC5DQ6UXZ4 953 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 EPHX4Q8IUS5 362 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 OR7G3Q8NG95 312 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 OR8J3Q8NGG0 315 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 THUMPD3Q9BV44 507 aaKnown RBP17.97■□□□□ 0.47
HOXA9-201ENST00000343483 TEX101Q9BY14 249 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 EPB41L1Q9H4G0 881 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 PPT2Q9UMR5 302 aa17.97■□□□□ 0.47
HOXA9-201ENST00000343483 TDRKHQ9Y2W6 561 aaKnown RBP17.97■□□□□ 0.47
HOXA9-201ENST00000343483 H3BQ06 376 aaPredicted RBP17.96■□□□□ 0.47
HOXA9-201ENST00000343483 OR6B1O95007 311 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 DNTTP04053 509 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 LTBRP36941 435 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 CCT8P50990 548 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 PCDH1Q08174 1060 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 ACSM2AQ08AH3 577 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 RPA4Q13156 261 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 SF1Q15637 639 aaKnown RBP17.96■□□□□ 0.47
HOXA9-201ENST00000343483 ACSM2BQ68CK6 577 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 KRT80Q6KB66 452 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 SYT12Q8IV01 421 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 GALNT15Q8N3T1 639 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 HUS1BQ8NHY5 278 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 CDC26Q8NHZ8 85 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 BIRC7Q96CA5 298 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 IL17FQ96PD4 163 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 C9orf16Q9BUW7 83 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 SGPP1Q9BX95 441 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 RPF2Q9H7B2 306 aaKnown RBP17.96■□□□□ 0.47
HOXA9-201ENST00000343483 CCDC177Q9NQR7 707 aaPredicted RBP17.96■□□□□ 0.47
HOXA9-201ENST00000343483 PCDHB3Q9Y5E6 796 aa17.96■□□□□ 0.47
HOXA9-201ENST00000343483 CFAP20Q9Y6A4 193 aaKnown RBP17.96■□□□□ 0.47
HOXA9-201ENST00000343483 EGFP01133 1207 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 ACPPP15309 386 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 RPS21P63220 83 aaKnown RBP17.95■□□□□ 0.46
HOXA9-201ENST00000343483 PHC1P78364 1004 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 APOFQ13790 326 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 PON2Q15165 354 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 FXNQ16595 210 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 GLYATQ6IB77 296 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 MED27Q6P2C8 311 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 ANKRD46Q86W74 232 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 C2orf73Q8N5S3 287 aaPredicted RBP17.95■□□□□ 0.46
HOXA9-201ENST00000343483 IL17RCQ8NAC3 791 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 TFGQ92734 400 aaPredicted RBP17.95■□□□□ 0.46
HOXA9-201ENST00000343483 ANKRD60Q9BZ19 345 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 TRIM4Q9C037 500 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 GRIP2Q9C0E4 1043 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 SLC25A37Q9NYZ2 338 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 MAGEL2Q9UJ55 1249 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 RNF103-CHMP3A0A140T963 221 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 A0A1W2PQU0 124 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 SLC34A2O95436 690 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 ETHE1O95571 254 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 KLF8O95600 359 aaPredicted RBP17.95■□□□□ 0.46
HOXA9-201ENST00000343483 HOXB2P14652 356 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 RPL10P27635 214 aaKnown RBP17.95■□□□□ 0.46
HOXA9-201ENST00000343483 SLBPQ14493 270 aaKnown RBP eCLIP17.95■□□□□ 0.46
HOXA9-201ENST00000343483 AGERQ15109 404 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 ATP6AP1Q15904 470 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 GTDC1Q4AE62 458 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 MSRB3Q8IXL7 192 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 TBC1D21Q8IYX1 336 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 METTL25Q8N6Q8 603 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 MFSD2AQ8NA29 543 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 TP53I13Q8NBR0 393 aaPredicted RBP17.95■□□□□ 0.46
HOXA9-201ENST00000343483 PAPD5Q8NDF8 572 aaKnown RBP17.95■□□□□ 0.46
HOXA9-201ENST00000343483 RAD51AP1Q96B01 352 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 TESCQ96BS2 214 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 NSMCE2Q96MF7 247 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 GABRG3Q99928 467 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 BRF2Q9HAW0 419 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 PADI4Q9UM07 663 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 OAZ3Q9UMX2 235 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 V9GYQ6 96 aa17.95■□□□□ 0.46
HOXA9-201ENST00000343483 KMOO15229 486 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 ADAM23O75077 832 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 B3GALT4O96024 378 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 HSD3B1P14060 373 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 HSD3B2P26439 372 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 MAT2AP31153 395 aaKnown RBP17.94■□□□□ 0.46
HOXA9-201ENST00000343483 CYP4F3Q08477 520 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 NADK2Q4G0N4 442 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 METRNLQ641Q3 311 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 CHST15Q7LFX5 561 aaPredicted RBP17.94■□□□□ 0.46
HOXA9-201ENST00000343483 DCUN1D3Q8IWE4 304 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 RIMKLAQ8IXN7 391 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 LRRC56Q8IYG6 542 aaPredicted RBP17.94■□□□□ 0.46
HOXA9-201ENST00000343483 OXR1Q8N573 874 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 GPR156Q8NFN8 814 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms