RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ANKRD12Q6UB98 2062 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 HYKKA2RU49 373 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 C9J4A7 227 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 H7BY64 318 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 KIF2AO00139 706 aaPredicted RBP14.57□□□□□ -0.08
PRKN-201ENST00000338468 CDC7O00311 574 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 HAT1O14929 419 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 FAM155BO75949 473 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 ATXN8OSP0DMR3 200 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 EZRP15311 586 aaKnown RBP14.57□□□□□ -0.08
PRKN-201ENST00000338468 NPPBP16860 134 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 ALAS2P22557 587 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 PMS2P54278 862 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 SNRPNP63162 240 aaKnown RBP14.57□□□□□ -0.08
PRKN-201ENST00000338468 UBAP2LQ14157 1087 aaKnown RBP14.57□□□□□ -0.08
PRKN-201ENST00000338468 KBTBD12Q3ZCT8 623 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 THEMIS2Q5TEJ8 643 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 YOD1Q5VVQ6 348 aaPredicted RBP14.57□□□□□ -0.08
PRKN-201ENST00000338468 CPZQ66K79 652 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 PLD3Q8IV08 490 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 OR56A3Q8NH54 315 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 FBF1Q8TES7 1133 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 ANKRD7Q92527 254 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 CDKL2Q92772 493 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 FBXL8Q96CD0 374 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 PRAP1Q96NZ9 151 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 GPR22Q99680 433 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 TRIM55Q9BYV6 548 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 POPDC3Q9HBV1 291 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 ARL15Q9NXU5 204 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 IFT80Q9P2H3 777 aaPredicted RBP14.57□□□□□ -0.08
PRKN-201ENST00000338468 TUBD1Q9UJT1 453 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 NOVA2Q9UNW9 492 aaKnown RBP14.57□□□□□ -0.08
PRKN-201ENST00000338468 MAN2B2Q9Y2E5 1009 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 CCDC88CQ9P219 2028 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 TEX15Q9BXT5 2789 aa14.57□□□□□ -0.08
PRKN-201ENST00000338468 MDC1Q14676 2089 aaKnown RBP14.56□□□□□ -0.08
PRKN-201ENST00000338468 NPEPPSL1A6NEC2 478 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 P2RX6O15547 441 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 EIF2S1P05198 315 aaKnown RBP14.56□□□□□ -0.08
PRKN-201ENST00000338468 UMODP07911 640 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 ENO2P09104 434 aaPredicted RBP14.56□□□□□ -0.08
PRKN-201ENST00000338468 GP1BBP13224 206 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 ECHS1P30084 290 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 GP5P40197 560 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 AP1S2P56377 157 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 CSNK1G2P78368 415 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 POU4F1Q01851 419 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 EFTUD2Q15029 972 aaKnown RBP eCLIP14.56□□□□□ -0.08
PRKN-201ENST00000338468 ZKSCAN8Q15776 578 aaPredicted RBP14.56□□□□□ -0.08
PRKN-201ENST00000338468 HKDC1Q2TB90 917 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 LCTLQ6UWM7 567 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 APLFQ8IW19 511 aaPredicted RBP14.56□□□□□ -0.08
PRKN-201ENST00000338468 NKAPQ8N5F7 415 aaKnown RBP14.56□□□□□ -0.08
PRKN-201ENST00000338468 METTL27Q8N6F8 245 aaPredicted RBP14.56□□□□□ -0.08
PRKN-201ENST00000338468 TTC29Q8NA56 475 aaPredicted RBP14.56□□□□□ -0.08
PRKN-201ENST00000338468 THAP4Q8WY91 577 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 PYCR2Q96C36 320 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 ABHD17AQ96GS6 310 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 OR4K3Q96R72 315 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 C17orf62Q9BQA9 187 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 PCBD2Q9H0N5 130 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 TMEM184CQ9NVA4 438 aa14.56□□□□□ -0.08
PRKN-201ENST00000338468 UTP6Q9NYH9 597 aaKnown RBP14.56□□□□□ -0.08
PRKN-201ENST00000338468 RUVBL1Q9Y265 456 aaKnown RBP14.56□□□□□ -0.08
PRKN-201ENST00000338468 CTAGE15A4D2H0 777 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 K7EM74 188 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 PHGDHO43175 533 aaKnown RBP14.55□□□□□ -0.08
PRKN-201ENST00000338468 DNAJB5O75953 348 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 GUCA1CO95843 209 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 HIST1H2AGP0C0S8 130 aaPredicted RBP14.55□□□□□ -0.08
PRKN-201ENST00000338468 CTAGE8P0CG41 777 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 HIST1H2ADP20671 130 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 GMPRP36959 345 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 OR1D4P47884 311 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 EMP3P54852 163 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 ILF2Q12905 390 aaKnown RBP14.55□□□□□ -0.08
PRKN-201ENST00000338468 CHAF1BQ13112 559 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 USP10Q14694 798 aaKnown RBP14.55□□□□□ -0.08
PRKN-201ENST00000338468 TSNQ15631 228 aaKnown RBP14.55□□□□□ -0.08
PRKN-201ENST00000338468 FAM214AQ32MH5 1076 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 OVCH1Q7RTY7 1134 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 VN1R4Q7Z5H5 301 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 CTAGE6Q86UF2 777 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 CTAGE4Q8IX94 777 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 CTAGE3PQ8IX95 158 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 PIAS4Q8N2W9 510 aaPredicted RBP14.55□□□□□ -0.08
PRKN-201ENST00000338468 SPATA6LQ8N4H0 392 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 CSNK1A1LQ8N752 337 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 PPM1NQ8N819 430 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 MNS1Q8NEH6 495 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 OR2Y1Q8NGV0 311 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 KIF18AQ8NI77 898 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 FKBP10Q96AY3 582 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 ALKBH8Q96BT7 664 aaKnown RBP14.55□□□□□ -0.08
PRKN-201ENST00000338468 HIST1H2AHQ96KK5 128 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 HIST1H2AJQ99878 128 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 H2AFJQ9BTM1 129 aa14.55□□□□□ -0.08
PRKN-201ENST00000338468 UNKQ9C0B0 810 aaKnown RBP14.55□□□□□ -0.08
PRKN-201ENST00000338468 EPN3Q9H201 632 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms