RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 CCDC80Q76M96 950 aa12.97□□□□□ -0.33
RC3H2-201ENST00000335387 TSPAN33Q86UF1 283 aa12.97□□□□□ -0.33
RC3H2-201ENST00000335387 RAVER1Q8IY67 606 aaKnown RBP12.97□□□□□ -0.33
RC3H2-201ENST00000335387 FCGR1BQ92637 280 aa12.97□□□□□ -0.33
RC3H2-201ENST00000335387 WDR34Q96EX3 536 aa12.97□□□□□ -0.33
RC3H2-201ENST00000335387 TBCDQ9BTW9 1192 aa12.97□□□□□ -0.33
RC3H2-201ENST00000335387 NXF2Q9GZY0 626 aaKnown RBP12.97□□□□□ -0.33
RC3H2-201ENST00000335387 ELOVL6Q9H5J4 265 aa12.97□□□□□ -0.33
RC3H2-201ENST00000335387 PCDHB11Q9Y5F2 797 aa12.97□□□□□ -0.33
RC3H2-201ENST00000335387 INSL5Q9Y5Q6 135 aa12.97□□□□□ -0.33
RC3H2-201ENST00000335387 CPQQ9Y646 472 aa12.97□□□□□ -0.33
RC3H2-201ENST00000335387 PMF1-BGLAPU3KQ54 211 aa12.97□□□□□ -0.33
RC3H2-201ENST00000335387 hCG_2014768A0A024R1R8 64 aa12.96□□□□□ -0.33
RC3H2-201ENST00000335387 OR2A25A4D2G3 310 aa12.96□□□□□ -0.33
RC3H2-201ENST00000335387 ITGB6P18564 788 aa12.96□□□□□ -0.33
RC3H2-201ENST00000335387 PCGF2P35227 344 aa12.96□□□□□ -0.33
RC3H2-201ENST00000335387 SOX11P35716 441 aa12.96□□□□□ -0.33
RC3H2-201ENST00000335387 SPINT3P49223 89 aa12.96□□□□□ -0.33
RC3H2-201ENST00000335387 SNRPD1P62314 119 aaKnown RBP12.96□□□□□ -0.33
RC3H2-201ENST00000335387 ADPRMQ3LIE5 342 aa12.96□□□□□ -0.33
RC3H2-201ENST00000335387 TOR1AIP1Q5JTV8 583 aa12.96□□□□□ -0.33
RC3H2-201ENST00000335387 LDLRAP1Q5SW96 308 aa12.96□□□□□ -0.33
RC3H2-201ENST00000335387 DOK6Q6PKX4 331 aa12.96□□□□□ -0.33
RC3H2-201ENST00000335387 CCDC71Q8IV32 467 aaPredicted RBP12.96□□□□□ -0.33
RC3H2-201ENST00000335387 FBXO15Q8NCQ5 510 aaPredicted RBP12.96□□□□□ -0.33
RC3H2-201ENST00000335387 APH1BQ8WW43 257 aa12.96□□□□□ -0.33
RC3H2-201ENST00000335387 ZNF689Q96CS4 500 aaPredicted RBP12.96□□□□□ -0.33
RC3H2-201ENST00000335387 ACOT13Q9NPJ3 140 aa12.96□□□□□ -0.33
RC3H2-201ENST00000335387 MTCL1Q9Y4B5 1905 aaKnown RBP12.96□□□□□ -0.33
RC3H2-201ENST00000335387 TMEM221A6NGB7 291 aa12.96□□□□□ -0.34
RC3H2-201ENST00000335387 CLIC1O00299 241 aa12.96□□□□□ -0.34
RC3H2-201ENST00000335387 KPNA4O00629 521 aaPredicted RBP12.96□□□□□ -0.34
RC3H2-201ENST00000335387 LILRB3O75022 631 aa12.96□□□□□ -0.34
RC3H2-201ENST00000335387 WBP4O75554 376 aaKnown RBP12.96□□□□□ -0.34
RC3H2-201ENST00000335387 ZNF30P17039 623 aa12.96□□□□□ -0.34
RC3H2-201ENST00000335387 ALDH7A1P49419 539 aaKnown RBP12.96□□□□□ -0.34
RC3H2-201ENST00000335387 ARHGEF7Q14155 803 aa12.96□□□□□ -0.34
RC3H2-201ENST00000335387 TMC8Q8IU68 726 aa12.96□□□□□ -0.34
RC3H2-201ENST00000335387 LACC1Q8IV20 430 aa12.96□□□□□ -0.34
RC3H2-201ENST00000335387 SLC39A11Q8N1S5 342 aa12.96□□□□□ -0.34
RC3H2-201ENST00000335387 OR6Q1Q8NGQ2 317 aa12.96□□□□□ -0.34
RC3H2-201ENST00000335387 MCOLN3Q8TDD5 553 aa12.96□□□□□ -0.34
RC3H2-201ENST00000335387 ABTB1Q969K4 478 aaPredicted RBP12.96□□□□□ -0.34
RC3H2-201ENST00000335387 RAD9AQ99638 391 aa12.96□□□□□ -0.34
RC3H2-201ENST00000335387 BARD1Q99728 777 aaKnown RBP12.96□□□□□ -0.34
RC3H2-201ENST00000335387 SUV39H2Q9H5I1 410 aa12.96□□□□□ -0.34
RC3H2-201ENST00000335387 RUVBL1Q9Y265 456 aaKnown RBP12.96□□□□□ -0.34
RC3H2-201ENST00000335387 HNRNPCP07910 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
RC3H2-201ENST00000335387 ATP1B2P14415 290 aaPredicted RBP12.95□□□□□ -0.34
RC3H2-201ENST00000335387 CD22P20273 847 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 CYP2A7P20853 494 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 PTX3P26022 381 aaPredicted RBP12.95□□□□□ -0.34
RC3H2-201ENST00000335387 PNLIPRP1P54315 467 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 RAE1P78406 368 aaKnown RBP12.95□□□□□ -0.34
RC3H2-201ENST00000335387 KCNJ10P78508 379 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 PTCHD3Q3KNS1 767 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 C16orf87Q6PH81 154 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 P2RY13Q9BPV8 354 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 TM6SF2Q9BZW4 377 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 TSC22D4Q9Y3Q8 395 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 TRIM17Q9Y577 477 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 EVPLLA8MZ36 301 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 SCAMP2O15127 329 aaKnown RBP12.95□□□□□ -0.34
RC3H2-201ENST00000335387 C9P02748 559 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 MYCLP1P12525 358 aaPredicted RBP12.95□□□□□ -0.34
RC3H2-201ENST00000335387 PRKACGP22612 351 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 ARL1P40616 181 aaPredicted RBP12.95□□□□□ -0.34
RC3H2-201ENST00000335387 VLDLRP98155 873 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 CLCA4Q14CN2 919 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 NPTX1Q15818 432 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 CPSF6Q16630 551 aaKnown RBP eCLIP12.95□□□□□ -0.34
RC3H2-201ENST00000335387 KIAA0907Q7Z7F0 614 aaPredicted RBP12.95□□□□□ -0.34
RC3H2-201ENST00000335387 KLHL23Q8NBE8 558 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 SLAIN1Q8ND83 568 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■□□□ 13.1
RC3H2-201ENST00000335387 CNIH3Q8TBE1 160 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 NCLNQ969V3 563 aa12.95□□□□□ -0.34
RC3H2-201ENST00000335387 REXO4Q9GZR2 422 aaKnown RBP12.95□□□□□ -0.34
RC3H2-201ENST00000335387 MAGEB17A8MXT2 336 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 FPGTO14772 594 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 ALOX5P09917 674 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 TFPTP0C1Z6 253 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 TGM1P22735 817 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 ASMTP46597 345 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 ARHGDIAP52565 204 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 EPHB3P54753 998 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 PRPF38BQ5VTL8 546 aaKnown RBP12.94□□□□□ -0.34
RC3H2-201ENST00000335387 C22orf39Q6P5X5 142 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 TUBA3EQ6PEY2 450 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 CYP2U1Q7Z449 544 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 TSEN54Q7Z6J9 526 aaKnown RBP12.94□□□□□ -0.34
RC3H2-201ENST00000335387 NLRP8Q86W28 1048 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 OR4C15Q8NGM1 316 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 HCAR2Q8TDS4 363 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 RORBQ92753 470 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 CCDC138Q96M89 665 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 VPS35Q96QK1 796 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 SLIRPQ9GZT3 109 aaKnown RBP12.94□□□□□ -0.34
RC3H2-201ENST00000335387 RAD18Q9NS91 495 aa12.94□□□□□ -0.34
RC3H2-201ENST00000335387 ERVK-18Q9QC07 812 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms