RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ZNF425Q6IV72 752 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 ZNF740Q8NDX6 193 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 METTL6Q8TCB7 284 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 NAT6Q93015 286 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 PTCD3Q96EY7 689 aaKnown RBP20.68■□□□□ 0.9
TPM1-204ENST00000334895 CNDP2Q96KP4 475 aaKnown RBP20.68■□□□□ 0.9
TPM1-204ENST00000334895 DPH7Q9BTV6 452 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 MATN2O00339 956 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 FFAR3O14843 346 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 GPR42O15529 346 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 CCNDBP1O95273 360 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 TGDSO95455 350 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 UROSP10746 265 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 GRIA3P42263 894 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 HTR6P50406 440 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 CCR8P51685 355 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 GPLD1P80108 840 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 SF3A3Q12874 501 aaKnown RBP eCLIP20.67■□□□□ 0.99e-9■■■■□ 23.4
TPM1-204ENST00000334895 AMZ1Q400G9 498 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 ARMC6Q6NXE6 501 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 NAXDQ8IW45 347 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 WDR75Q8IWA0 830 aaKnown RBP20.67■□□□□ 0.9
TPM1-204ENST00000334895 RFWD2Q8NHY2 731 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 BAHD1Q8TBE0 780 aaPredicted RBP20.67■□□□□ 0.9
TPM1-204ENST00000334895 CCDC3Q9BQI4 270 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 RAB33BQ9H082 229 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 TUBB1Q9H4B7 451 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 NPHS2Q9NP85 383 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 CAPN5O15484 640 aaPredicted RBP20.67■□□□□ 0.9
TPM1-204ENST00000334895 CBFA2T3O75081 653 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 LDOC1O95751 146 aaPredicted RBP20.67■□□□□ 0.9
TPM1-204ENST00000334895 PVRP15151 417 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 MAGP20916 626 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 HNF4AP41235 474 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 REEP5Q00765 189 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 ZRSR2Q15696 482 aaKnown RBP20.67■□□□□ 0.9
TPM1-204ENST00000334895 STPG1Q5TH74 334 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 ADNP2Q6IQ32 1131 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 IRGCQ6NXR0 463 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 IFI44Q8TCB0 444 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 NCSTNQ92542 709 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 EFCAB11Q9BUY7 163 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 SLC29A3Q9BZD2 475 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 EPB41L1Q9H4G0 881 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 EPHA6Q9UF33 1036 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 ZNF490Q9ULM2 529 aaPredicted RBP20.67■□□□□ 0.9
TPM1-204ENST00000334895 PTGDR2Q9Y5Y4 395 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 USH1CQ9Y6N9 552 aa20.67■□□□□ 0.9
TPM1-204ENST00000334895 UNC13CQ8NB66 2214 aa20.66■□□□□ 0.9
TPM1-204ENST00000334895 A0A0J9YY10 115 aa20.66■□□□□ 0.9
TPM1-204ENST00000334895 A0A1W2PQM1 296 aa20.66■□□□□ 0.9
TPM1-204ENST00000334895 TNFSF14O43557 240 aa20.66■□□□□ 0.9
TPM1-204ENST00000334895 DUX1O43812 170 aa20.66■□□□□ 0.9
TPM1-204ENST00000334895 CRCPO75575 148 aa20.66■□□□□ 0.9
TPM1-204ENST00000334895 HOXB3P14651 431 aaPredicted RBP20.66■□□□□ 0.9
TPM1-204ENST00000334895 ALOX15P16050 662 aaPredicted RBP20.66■□□□□ 0.9
TPM1-204ENST00000334895 FCRL6Q6DN72 434 aa20.66■□□□□ 0.9
TPM1-204ENST00000334895 TWIST2Q8WVJ9 160 aa20.66■□□□□ 0.9
TPM1-204ENST00000334895 AHCYL2Q96HN2 611 aaKnown RBP20.66■□□□□ 0.9
TPM1-204ENST00000334895 CCT8L2Q96SF2 557 aa20.66■□□□□ 0.9
TPM1-204ENST00000334895 KLHL25Q9H0H3 589 aa20.66■□□□□ 0.9
TPM1-204ENST00000334895 KCNK13Q9HB14 408 aa20.66■□□□□ 0.9
TPM1-204ENST00000334895 FARSBQ9NSD9 589 aaKnown RBP20.66■□□□□ 0.9
TPM1-204ENST00000334895 TMEM184CQ9NVA4 438 aa20.66■□□□□ 0.9
TPM1-204ENST00000334895 KLK4Q9Y5K2 254 aa20.66■□□□□ 0.9
TPM1-204ENST00000334895 H0YIV9 168 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 MANBAO00462 879 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 HDAC3O15379 428 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 KIF1CO43896 1103 aaKnown RBP20.65■□□□□ 0.9
TPM1-204ENST00000334895 PRAMEF10O60809 474 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 SKAP2O75563 359 aaPredicted RBP20.65■□□□□ 0.9
TPM1-204ENST00000334895 FKBP9O95302 570 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 CKMT2P17540 419 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 DUSP3P51452 185 aaPredicted RBP20.65■□□□□ 0.9
TPM1-204ENST00000334895 CCL7P80098 99 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 BTKQ06187 659 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 ZIC1Q15915 447 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 PDCD2Q16342 344 aaPredicted RBP20.65■□□□□ 0.9
TPM1-204ENST00000334895 VWA5B1Q5TIE3 1220 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 FAM92BQ6ZTR7 304 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 USP53Q70EK8 1073 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 CPLX4Q7Z7G2 160 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 PAQR7Q86WK9 346 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 WDR20Q8TBZ3 569 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 MAGEB10Q96LZ2 347 aaPredicted RBP20.65■□□□□ 0.9
TPM1-204ENST00000334895 TGM7Q96PF1 710 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 MAP3K3Q99759 626 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 PLCD4Q9BRC7 762 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 SYNPO2LQ9H987 977 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 TMEM9Q9P0T7 183 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 FTSJ1Q9UET6 329 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 BTRCQ9Y297 605 aa20.65■□□□□ 0.9
TPM1-204ENST00000334895 FEZF1A0PJY2 475 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 OR2A25A4D2G3 310 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 HAT1O14929 419 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 HMOX2P30519 316 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 PPM1FP49593 454 aaPredicted RBP20.64■□□□□ 0.9
TPM1-204ENST00000334895 NEK2P51955 445 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 SQSTM1Q13501 440 aa20.64■□□□□ 0.9
TPM1-204ENST00000334895 ABRAXAS2Q15018 415 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms