RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 IL22RA1Q8N6P7 574 aa15.22■□□□□ 0.03
CCDC28A-201ENST00000332797 MZB1Q8WU39 189 aa15.22■□□□□ 0.03
CCDC28A-201ENST00000332797 SLC5A11Q8WWX8 675 aa15.22■□□□□ 0.03
CCDC28A-201ENST00000332797 ESAMQ96AP7 390 aa15.22■□□□□ 0.03
CCDC28A-201ENST00000332797 CLIP3Q96DZ5 547 aa15.22■□□□□ 0.03
CCDC28A-201ENST00000332797 STARD5Q9NSY2 213 aa15.22■□□□□ 0.03
CCDC28A-201ENST00000332797 CPSF2Q9P2I0 782 aaKnown RBP15.22■□□□□ 0.03
CCDC28A-201ENST00000332797 ZFHX4Q86UP3 3567 aa15.22■□□□□ 0.03
CCDC28A-201ENST00000332797 ACACAQ13085 2346 aa15.22■□□□□ 0.03
CCDC28A-201ENST00000332797 A0A087WV48 116 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 LOC105369274A0A096LPK9 316 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 LOC102723532A0A0G2JNH3 316 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 TLDC2A0PJX2 215 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 FOXO6A8MYZ6 492 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 GOLGA8RI6L899 631 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 CDH16O75309 829 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 MT-ND3P03897 115 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 EIF2S1P05198 315 aaKnown RBP15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 RBP1P09455 135 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 CCNYL3P0C7X3 344 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 GFAPP14136 432 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 KRT15P19012 456 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 CCR8P51685 355 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 CSNK1G2P78368 415 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 MAP7Q14244 749 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 TCTE1Q5JU00 501 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 MANEAQ5SRI9 462 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 TLDC1Q6P9B6 456 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 KLHDC8AQ8IYD2 350 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 OR4N4Q8N0Y3 316 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 SLC38A9Q8NBW4 561 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 NEIL2Q969S2 332 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 XPR1Q9UBH6 696 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 PTBP2Q9UKA9 531 aaKnown RBP15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 PLAAQ9Y263 795 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 KCNE2Q9Y6J6 123 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 AP1M2Q9Y6Q5 423 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 USP24Q9UPU5 2620 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 ZZEF1O43149 2961 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 CELSR3Q9NYQ7 3312 aa15.21■□□□□ 0.03
CCDC28A-201ENST00000332797 A0A1W2PPM1 405 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 FEZF1A0PJY2 475 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 H0YGG7 62 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 CCNT2O60583 730 aaKnown RBP15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 SRPX2O60687 465 aaPredicted RBP15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 STK16O75716 305 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 HBQ1P09105 142 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 PYGBP11216 843 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 MTHFD2P13995 350 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 GRK3P35626 688 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 GGT5P36269 586 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 AGTR2P50052 363 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 ARF3P61204 181 aaPredicted RBP15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 MEF2AQ02078 507 aaPredicted RBP15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 TLE3Q04726 772 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 CDC16Q13042 620 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 GPS2Q13227 327 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 SRSF6Q13247 344 aaKnown RBP15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 WASHC2DQ5SRD0 308 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 CATSPEREQ5SY80 951 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 BROXQ5VW32 411 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 TMPRSS11BQ86T26 416 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 CYP4X1Q8N118 509 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 SNX31Q8N9S9 440 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 TTC29Q8NA56 475 aaPredicted RBP15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 ACMSDQ8TDX5 336 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 RERGQ96A58 199 aaPredicted RBP15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 ZNF285Q96NJ3 590 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 NDC1Q9BTX1 674 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 SYNPO2LQ9H987 977 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 DNAJC11Q9NVH1 559 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 MAP2K7O14733 419 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 STAT5AP42229 794 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 RPS15AP62244 130 aaKnown RBP15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 ABHD18Q0P651 414 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 GRM7Q14831 915 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 RASA2Q15283 850 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 PFKFB4Q16877 469 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 LRRC70Q7Z2Q7 622 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 ABHD11Q8NFV4 315 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 UBTD2Q8WUN7 234 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 HNRNPLLQ8WVV9 542 aaKnown RBP15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 MR1Q95460 341 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 OR2A5Q96R48 311 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 MRPL57Q9BQC6 102 aaKnown RBP15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 CD244Q9BZW8 370 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 MRPL46Q9H2W6 279 aaKnown RBP15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 PELI2Q9HAT8 420 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 LHX9Q9NQ69 397 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 TXLNGQ9NUQ3 528 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 DHCR7Q9UBM7 475 aaKnown RBP15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 PADI1Q9ULC6 663 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 SRPK3Q9UPE1 567 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 ASB1Q9Y576 335 aa15.2■□□□□ 0.02
CCDC28A-201ENST00000332797 HEATR5BQ9P2D3 2071 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 LAMA5O15230 3695 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 LOC101059948A0A1B0GTJ6 334 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 TK2O00142 265 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 MEN1O00255 615 aa15.19■□□□□ 0.02
CCDC28A-201ENST00000332797 STATHP02808 62 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms