RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 C5AR2Q9P296 337 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 POLG2Q9UHN1 485 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 BLOC1S6Q9UL45 172 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 DMTF1Q9Y222 760 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 WDR37Q9Y2I8 494 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 KRBA1A5PL33 1030 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 SDHDO14521 159 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 SNNO75324 88 aaPredicted RBP15.37■□□□□ 0.05
PDGFB-201ENST00000331163 TSPAN12O95859 305 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 THRAP10827 490 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 G6PDP11413 515 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 GRK3P35626 688 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 PTK2BQ14289 1009 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 LIX1Q8N485 282 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 METTL27Q8N6F8 245 aaPredicted RBP15.37■□□□□ 0.05
PDGFB-201ENST00000331163 WDR92Q96MX6 357 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 OR2M4Q96R27 311 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 CCDC28BQ9BUN5 200 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 ARMC7Q9H6L4 198 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 EFCAB1Q9HAE3 211 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 APOBEC3BQ9UH17 382 aaKnown RBP15.37■□□□□ 0.05
PDGFB-201ENST00000331163 KLF11O14901 512 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 RGS14O43566 566 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 LRRC74AQ0VAA2 488 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 MTAPQ13126 283 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 DOC2AQ14183 400 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 ANKDD1AQ495B1 522 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 BNC2Q6ZN30 1099 aaPredicted RBP15.36■□□□□ 0.05
PDGFB-201ENST00000331163 KRTCAP2Q8N6L1 136 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 DDHD1Q8NEL9 900 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 NEIL2Q969S2 332 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 SERPINI1Q99574 410 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 TRPV4Q9HBA0 871 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 THEGQ9P2T0 379 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 SNX6Q9UNH7 406 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 SLCO1B1Q9Y6L6 691 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 CCDC154A6NI56 674 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 H3BNX3 289 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 NPHS1O60500 1241 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 MRPS21P82921 87 aaKnown RBP15.36■□□□□ 0.05
PDGFB-201ENST00000331163 CDKN3Q16667 212 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 TMEM184AQ6ZMB5 413 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 ZNF480Q8WV37 535 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 FAR2Q96K12 515 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 SMOC1Q9H4F8 434 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 LRTM1Q9HBL6 345 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 EBF1Q9UH73 591 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 NDUFAF1Q9Y375 327 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 SCN3AQ9NY46 2000 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 RFTN2Q52LD8 501 aaPredicted RBP15.36■□□□□ 0.05
PDGFB-201ENST00000331163 USP39Q53GS9 565 aaKnown RBP15.36■□□□□ 0.05
PDGFB-201ENST00000331163 OR10Q1Q8NGQ4 319 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 HM13Q8TCT9 377 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 ATL1Q8WXF7 558 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 EGLN2Q96KS0 407 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 COQ10AQ96MF6 247 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 MIEF1Q9NQG6 463 aa15.36■□□□□ 0.05
PDGFB-201ENST00000331163 ALPK3Q96L96 1907 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 UROSP10746 265 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 AQP1P29972 269 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 EIF2DP41214 584 aaKnown RBP15.35■□□□□ 0.05
PDGFB-201ENST00000331163 RPS13P62277 151 aaKnown RBP15.35■□□□□ 0.05
PDGFB-201ENST00000331163 CYP2A13Q16696 494 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 FAM174BQ3ZCQ3 159 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 PRAMEF13Q5VWM6 474 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 NEK5Q6P3R8 708 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 ZNF786Q8N393 782 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 ARL10Q8N8L6 244 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 KYQ8NBH2 561 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 OR9A1PQ8NGU1 263 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 OR2I1PQ8NGU4 316 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 OR2T34Q8NGX1 318 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 AURKBQ96GD4 344 aaPredicted RBP15.35■□□□□ 0.05
PDGFB-201ENST00000331163 GUCD1Q96NT3 240 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 LYSMD1Q96S90 227 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 INSM2Q96T92 566 aaPredicted RBP15.35■□□□□ 0.05
PDGFB-201ENST00000331163 CIB1Q99828 191 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 RBCK1Q9BYM8 510 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 MRPS26Q9BYN8 205 aaKnown RBP15.35■□□□□ 0.05
PDGFB-201ENST00000331163 PCDHAC1Q9H158 963 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 EPS15L1Q9UBC2 864 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 PRSS38A1L453 326 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 CHURC1-FNTBB4DL54 471 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 PRAMEF10O60809 474 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 PDYNP01213 254 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 CELA2BP08218 269 aaPredicted RBP15.35■□□□□ 0.05
PDGFB-201ENST00000331163 COX7A2P14406 83 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 FNTBP49356 437 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 MS4A2Q01362 244 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 CSTF1Q05048 431 aaKnown RBP15.35■□□□□ 0.05
PDGFB-201ENST00000331163 HKDC1Q2TB90 917 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 EPGNQ6UW88 154 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 OOSP2Q86WS3 158 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 ZNF547Q8IVP9 402 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 DSELQ8IZU8 1212 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 CLEC4FQ8N1N0 589 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 RELTQ969Z4 430 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 THAP11Q96EK4 314 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 ZNF514Q96K75 400 aaPredicted RBP15.35■□□□□ 0.05
PDGFB-201ENST00000331163 SEPHS2Q99611 448 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms